TPS41 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR005630	Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS41 vs. Genbank
Match Name: AGQN03003403.1
Description: Cannabis sativa cultivar Purple Kush 003407F, whole genome shotgun sequence

HSP 1 Score: 582.815 bits (315), Expect = 5.547e-164
Identity = 388/422 (91.94%), Postives = 388/422 (91.94%), Query Frame = 1

Query:      432 AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAG-ACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTAT-A--AT--T-TCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTG 845
                ||||||||||||||||||||||||||||| ||||||| ||||  | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   |||||||  ||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||| |||||||| |  ||  | ||||| |||||||||| || || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    17986 AGAGATTTTTAATCATTTTAAGGACGAGATAGGAAAAATCAAAACGAACATGATTAGTGATGATATTATGGAAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAAGAAGTTAGAATTTTCACAACTCAATATCT-AAAGAACTACATTATAATGATATCACAAGAAA-GAAAGTTAATGATTGATAATGATAATGATTATGATTATGATATCGAAATAGTGAATCACGCTTTGGAGCTCCCACTTCATCGGAGGACTACAAGAACAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTG 18405

HSP 2 Score: 385.223 bits (208), Expect = 1.679e-104
Identity = 223/230 (96.96%), Postives = 223/230 (96.96%), Query Frame = 1

Query:      833 ATAT-ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct:    18496 ATATAATTAAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATTTGAGCTAATAACAGTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAG 18725

HSP 3 Score: 337.211 bits (182), Expect = 4.768e-90
Identity = 211/225 (93.78%), Postives = 211/225 (93.78%), Query Frame = 1

Query:      837 ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||| |||||||||| || |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    27968 ATT-AGGTGGTGGAGACATACTAAACTTGGAGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAATATTGGAATAAGATTTGAGTCAAAATTCAGCTATTTTAGAACAAAAACTGCCAAATTATTTGAGCTAGTAACATTTATAGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 28191

HSP 4 Score: 276.271 bits (149), Expect = 1.054e-71
Identity = 232/271 (85.61%), Postives = 232/271 (85.61%), Query Frame = 1

Query:      171 ATATG-AGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAATGT--T-AATAACCCTAATT----ATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAG 433
                ||||| ||| |||| |||||| | |||| || |||||  | |||  ||||||||||| |||| || ||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||| ||||||||| | ||| |  | |||||||||||||    |||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct:    15853 ATATGCAGGAAGAATCTTATACAGGTCGAGTCAAAGAATTGGAGATAGATGTGAAAAAGATGTTAATTGAGATGGAAAATTCTTTAATTCAACTTAAACTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGTTTTGAGGATGAAATAAATACTA-TTTGAAAGAAAAATATATTAATATGATCAATAACCCTAATTATTAATAATTTATATGTCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGCTATGCAGTACCTCAAG 16122

HSP 5 Score: 211.638 bits (114), Expect = 3.015e-52
Identity = 134/144 (93.06%), Postives = 134/144 (93.06%), Query Frame = 1

Query:     1060 AGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACG 1203
                ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||| | ||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct:    28326 AGATGGGATGTGAAAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTATCTTGTTTTACACAATACCATAAATGATATGGTATTTGAGGTGTTAAGAGACCAAGAAATCTCCATCAACATTCAATATCTTAAGAAAACG 28469

HSP 6 Score: 196.865 bits (106), Expect = 8.443e-48
Identity = 138/154 (89.61%), Postives = 138/154 (89.61%), Query Frame = 1

Query:     1203 GTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAAT 1356
                |||| | |||||||||| | ||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| || |||||||||||||||||| |||  |||||||||||
Sbjct:    36053 GTGGGTCGATATGTGTAAAAGTTTCTTGCAAGAGGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTAGGAGCACCAGTTATTCTTGTGCATGCTTATTTTTTTCACGCAAATAATAAT 36206

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BLAST of TPS41 vs. Genbank
Match Name: CM010790.2
Description: Cannabis sativa cultivar Purple Kush chromosome 1, whole genome shotgun sequence

HSP 1 Score: 582.815 bits (315), Expect = 5.547e-164
Identity = 388/422 (91.94%), Postives = 388/422 (91.94%), Query Frame = 1

Query:      432 AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAG-ACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTAT-A--AT--T-TCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTG 845
                ||||||||||||||||||||||||||||| ||||||| ||||  | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   |||||||  ||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||| |||||||| |  ||  | ||||| |||||||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct:  2519050 AGAGATTTTTAATCATTTTAAGGACGAGATAGGAAAAATCAAAACGAACATGATTAGTGATGATATTATGGAAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAAGAAGTTAGAATTTTCACAACTCAATATCTA-AAGAACTACATTATAATGATATCACAAGAAA-GAAAGTTAATGATTGATAATGATAATGATTATGATTATGATATCGAAATAGTGAATCACGCTTTGGAGCTCCCACTTCATTGGAGGACTACAAGAACAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGACGATCTAAAACATATATTCAGGTG 2519469

HSP 2 Score: 529.262 bits (286), Expect = 7.329e-148
Identity = 290/292 (99.32%), Postives = 290/292 (99.32%), Query Frame = 1

Query:     1470 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 1761
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  3117943 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTATTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATTTACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 3118234

HSP 3 Score: 387.07 bits (209), Expect = 4.668e-105
Identity = 228/237 (96.20%), Postives = 228/237 (96.20%), Query Frame = 1

Query:      827 TAAA-ACATAT-ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                |||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct:  2519552 TAAATATATATAATTAAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATTTGAGCTAATAACAGTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAG 2519788

HSP 4 Score: 337.211 bits (182), Expect = 4.768e-90
Identity = 211/225 (93.78%), Postives = 211/225 (93.78%), Query Frame = 1

Query:      837 ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||| |||||||||| || |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2529109 ATT-AGGTGGTGGAGACATACTAAACTTGGAGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAATATTGGAATAAGATTTGAGTCAAAATTCAGCTATTTTAGAACAAAAACTGCCAAATTATTTGAGCTAGTAACATTTATAGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 2529332

HSP 5 Score: 329.824 bits (178), Expect = 7.978e-88
Identity = 255/293 (87.03%), Postives = 255/293 (87.03%), Query Frame = 1

Query:     1470 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCTTTCCCC 1761
                ||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||||| ||||| ||  ||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| |||| |||||| ||||| ||  |||| |   || ||||||| |||| |||||
Sbjct:  3114430 GGATGAACTGAAAAGAGGCGATGTTCCTAAATCAATTCAATGTTATATGCACGATACTGGTGCTTCTGAAGATGAAGCTCGTGAGCACATAAAATATTTAATAAGTGAATCATGGAAGGAGATGAATAATGAAGATGGAAATATTAACTCTTTTTTCTCAAATGAATTTGTTCAAGTTTGCAAAAATCTTGGTAGAGCGTCACAATTCATGTATCAGTATGGCGATGGACATGCTTCTCAGAATAATCTATCGAAAGAGCGCGTTTT-AGGGTTGATTATTACTCCTATCCCC 3114721

HSP 6 Score: 292.891 bits (158), Expect = 1.047e-76
Identity = 234/270 (86.67%), Postives = 234/270 (86.67%), Query Frame = 1

Query:      171 ATATG-AGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAATGT--T-AATAACCCTAATT---ATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAG 433
                ||||| ||| |||| |||||| | |||| || |||||  | |||  ||||||||||| |||| || ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||| | ||| |  | |||||||||||||   |||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct:  2516922 ATATGCAGGAAGAATCTTATACAGGTCGAGTCAAAGAATTGGAGATAGATGTGAAAAAGATGTTAATTGAGATGGAAAATTCTTTAATTCAACTTGAACTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGTTTTGAGGATGAAATAAATACTATTTTGAAAGAAAAATATATTAATATGATCAATAACCCTAATTATAATAATTTATATGTCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGCTATGCAGTACCTCAAG 2517191

HSP 7 Score: 220.872 bits (119), Expect = 5.010e-55
Identity = 203/241 (84.23%), Postives = 203/241 (84.23%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGG 1471
                ||||| |||||||||| |||||||||||||  |||||||||| |||||||||  ||||||| |||||| ||||| |||| ||||| | || || |||||||||||||  ||  ||    |  | |  ||    ||| | |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct:  3117563 CAAGAGGCAAAATGGTTCTATAGTGGATACCAACCAACATTGCAAGAATATACTGAAAATGCTTGGATTTCAGTAGGAGGACCAGCTTTTCTTATGCATGCTTATTT--CT-GTT----T--T-ACCAA----TCTCA-TAACAAATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCGGATGATCTAGGAACATGTTCGG 3117788

HSP 8 Score: 200.558 bits (108), Expect = 6.527e-49
Identity = 132/144 (91.67%), Postives = 132/144 (91.67%), Query Frame = 1

Query:     1060 AGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACG 1203
                ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || || |||||| | ||||||||| |||  |||||||||||||||||||| ||||||||||||
Sbjct:  2529471 AGATGGGATGTGAAAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTATCTTGTTTTACACAATACCATAAATGATATGGTCTTTGAGGTGTTAAGAGACCAAGGAATCTCCATCAACATTCAATACCTTAAGAAAACG 2529614

HSP 9 Score: 191.325 bits (103), Expect = 3.928e-46
Identity = 137/154 (88.96%), Postives = 137/154 (88.96%), Query Frame = 1

Query:     1203 GTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAAT 1356
                |||| | |||||||||| | ||||  | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||| || |||||||||||||||||| |||  |||||||||||
Sbjct:  2530193 GTGGGTCGATATGTGTAAAAGTTTCTTGCAAGAGGCAAAATGGTACTATAGTGGATACACACCAACAATGGAAGAATATATTGAAAATGGTTGGATTTCAGTAGGAGCACCAGTTATTCTTGTGCATGCTTATTTTTTTCACGCAAATAATAAT 2530346

HSP 10 Score: 187.632 bits (101), Expect = 5.081e-45
Identity = 181/221 (81.90%), Postives = 181/221 (81.90%), Query Frame = 1

Query:      841 AGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                ||||||||||| ||||| |||||||| |||||| || ||||    |||||| |||| ||||| |||||||||||||  || ||| ||  || ||||||| ||   || |||| ||||| ||   |||  | ||||||||  |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||
Sbjct:  3143570 AGGTGGTGGAGCCATACAAAACTTGGAGAGAAAATGGATTTCTTTAGAGATAGATTAATGGAGTGTTTCTTATGGACTGTGGGAATAGCATGTGAGCCAGAAAAAAGCTATTATAGAAGAATGTCTGGAAGATTATATGTTCTAATAACAACAATTGATGATATATATGATGTTTATGGAACATTGGAGGAATTAGAGCTTTTCACTAATGCAGTTGAGAG 3143790

HSP 11 Score: 126.692 bits (68), Expect = 1.123e-26
Identity = 182/235 (77.45%), Postives = 182/235 (77.45%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACAT 1465
                ||||| ||||||||||  ||||||||||||| |||||||||| |||||||| | || ||||| ||| | || ||||||| || |||| || || |||||||  || |||| | ||    |  | | |||  |  ||  ||| |  | || | | |||||||||| ||||| ||| |||| || || ||||| |||| |||  |||||||||||||||||||||||||||||||||
Sbjct:  3114110 CAAGAGGCAAAATGGTTTTATAGTGGATACAAACCAACATTGCAAGAATATGTTGAGAATGGATGGTTGTCTGTGGGAGGACAAGTTATTCTTATGCATGC--ATATTTCGC-TT----T--T-ACAAA--T-CCT--GTTACCAAAGAGGCATTGGAATGTCTAAAAGACGGTCATCCTAACATAGTTCGCCATGCATCGATAATATTACGACTTGCAGATGATCTAGGAACAT 3114329


Match Name	Summary
AGQN03003403.1	E-Value: 5.547e-164, PID: 91.94 Description: Cannabis sativa cultivar Purple Kush 003407F, whole genome shotgun sequence [more]
CM010790.2	E-Value: 5.547e-164, PID: 91.94 Description: Cannabis sativa cultivar Purple Kush chromosome 1, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of TPS41 vs. Genbank
Match Name: PKGMv1-60501_t
Description: No definition line

HSP 1 Score: 577.275 bits (312), Expect = 3.403e-163
Identity = 398/437 (91.08%), Postives = 398/437 (91.08%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGC 1667
                ||||| |||||||||| |||||||||||||  |||||||||| |||||||||  ||||||| |||||| ||||| |||| ||||| | || || |||||||||||||  ||  ||    |  | |  ||    ||| | |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:       34 CAAGAGGCAAAATGGTTCTATAGTGGATACCAACCAACATTGCAAGAATATACTGAAAATGCTTGGATTTCAGTAGGAGGACCAGCTTTTCTTATGCATGCTTATTT--CT-GTT----T--T-ACCAA----TCTCA-TAACAAATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCGGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTATTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGC 455

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BLAST of TPS41 vs. Genbank
Match Name: PKGMv1-60500_t
Description: No definition line

HSP 1 Score: 451.703 bits (244), Expect = 2.152e-125
Identity = 439/532 (82.52%), Postives = 439/532 (82.52%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCTTTCCCC 1761
                ||||| ||||||||||  ||||||||||||| |||||||||| |||||||| | || ||||| ||| | || ||||||| || |||| || || |||||||  || |||| | ||    |  | | |||  |  ||  ||| |  | || | | |||||||||| ||||| ||| |||| || || ||||| |||| |||  |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||||| ||||| ||  ||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| |||| |||||| ||||| ||  |||| |   || ||||||| |||| |||||
Sbjct:       28 CAAGAGGCAAAATGGTTTTATAGTGGATACAAACCAACATTGCAAGAATATGTTGAGAATGGATGGTTGTCTGTGGGAGGACAAGTTATTCTTATGCATGC--ATATTTCGC-TT----T--T-ACAAA--T-CCT--GTTACCAAAGAGGCATTGGAATGTCTAAAAGACGGTCATCCTAACATAGTTCGCCATGCATCGATAATATTACGACTTGCAGATGATCTAGGAACATTGTCGGATGAACTGAAAAGAGGCGATGTTCCTAAATCAATTCAATGTTATATGCACGATACTGGTGCTTCTGAAGATGAAGCTCGTGAGCACATAAAATATTTAATAAGTGAATCATGGAAGGAGATGAATAATGAAGATGGAAATATTAACTCTTTTTTCTCAAATGAATTTGTTCAAGTTTGCAAAAATCTTGGTAGAGCGTCACAATTCATGTATCAGTATGGCGATGGACATGCTTCTCAGAATAATCTATCGAAAGAGCGCGTTTT-AGGGTTGATTATTACTCCTATCCCC 543

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BLAST of TPS41 vs. Genbank
Match Name: PKGMv1-70835_t
Description: No definition line

HSP 1 Score: 335.364 bits (181), Expect = 2.261e-90
Identity = 238/264 (90.15%), Postives = 238/264 (90.15%), Query Frame = 1

Query:      484 ATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAG-ACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTAT-A--AT--T-TCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGT 739
                ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   |||||||  ||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||| |||||||| |  ||  | ||||| |||||||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct:        4 ATTAGTGATGATATTATGGAAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAAGAAGTTAGAATTTTCACAACTCAATATCTA-AAGAACTACATTATAATGATATCACAAGAAA-GAAAGTTAATGATTGATAATGATAATGATTATGATTATGATATCGAAATAGTGAATCACGCTTTGGAGCTCCCACTTCATTGGAGGACTACAAGAACAGAAGCTAAGTGGTTCATCGACGCGT 265


Match Name	Summary
PKGMv1-60501_t	E-Value: 3.403e-163, PID: 91.08 Description: No definition line [more]
PKGMv1-60500_t	E-Value: 2.152e-125, PID: 82.52 Description: No definition line [more]
PKGMv1-70835_t	E-Value: 2.261e-90, PID: 90.15 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS41 vs. Genbank
Match Name: NC_044374.1
Description: Cannabis sativa chromosome 5, cs10, whole genome shotgun sequence

HSP 1 Score: 577.275 bits (312), Expect = 2.535e-162
Identity = 387/422 (91.71%), Postives = 387/422 (91.71%), Query Frame = 1

Query:      432 AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAG-ACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTAT-A--AT--T-TCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTG 845
                ||||||||||||||||||||||||||||| ||||||| ||||  | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   |||||||  ||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||| |||||||| |  ||  | ||||| |||||||||| || || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct:  2020238 AGAGATTTTTAATCATTTTAAGGACGAGATAGGAAAAATCAAAACGAACATGATTAGTGATGATATTATGGAAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAAGAAGTTAGAATTTTCACAACTCAATATCTA-AAGAACTACATTATAATGATATCACAAGAAA-GAAAGTTAATGATTGATAATGATAATGATTATGATTATGATATCGAAATAGTGAATCACGCTTTGGAGCTCCCACTTCATCGGAGGACTACAAGAACAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGACGATCTAAAACATATATTCAGGTG 2020657

HSP 2 Score: 529.262 bits (286), Expect = 7.200e-148
Identity = 290/292 (99.32%), Postives = 290/292 (99.32%), Query Frame = 1

Query:     1470 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 1761
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2422654 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTATTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATTTACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 2422363

HSP 3 Score: 370.45 bits (200), Expect = 4.618e-100
Identity = 225/237 (94.94%), Postives = 225/237 (94.94%), Query Frame = 1

Query:      827 TAAA-ACATAT-ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                |||| | |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct:  2020740 TAAATATATATAATTAAGGTGGTGGAGGCATACTAAACTTGGGGAGAATTTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAAATTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAATAACAACTGCCAAATTATTTGAGCTAATAACAGTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAG 2020976

HSP 4 Score: 337.211 bits (182), Expect = 4.684e-90
Identity = 211/225 (93.78%), Postives = 211/225 (93.78%), Query Frame = 1

Query:      837 ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||| |||||||||| || |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2035138 ATT-AGGTGGTGGAGACATACTAAACTTGGAGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAATATTGGAATAAGATTTGAGTCAAAATTCAGCTATTTTAGAACAAAAACTGCCAAATTATTTGAGCTAGTAACATTTATAGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 2035361

HSP 5 Score: 329.824 bits (178), Expect = 7.838e-88
Identity = 255/293 (87.03%), Postives = 255/293 (87.03%), Query Frame = 1

Query:     1470 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCTTTCCCC 1761
                ||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||||| ||||| ||  ||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| |||| |||||| ||||| ||  |||| |   || ||||||| |||| |||||
Sbjct:  2426184 GGATGAACTGAAAAGAGGCGATGTTCCTAAATCAATTCAATGTTATATGCACGATACTGGTGCTTCTGAAGATGAAGCTCGTGAGCACATAAAATATTTAATAAGTGAATCATGGAAGGAGATGAATAATGAAGATGGAAATATTAACTCTTTTTTCTCAAATGAATTTGTTCAAGTTTGCAAAAATCTTGGTAGAGCGTCACAATTCATGTATCAGTATGGCGATGGACATGCTTCTCAGAATAATCTATCGAAAGAGCGCGTTTT-AGGGTTGATTATTACTCCTATCCCC 2425893

HSP 6 Score: 292.891 bits (158), Expect = 1.028e-76
Identity = 234/270 (86.67%), Postives = 234/270 (86.67%), Query Frame = 1

Query:      171 ATATG-AGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAATGT--T-AATAACCCTAATT---ATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAG 433
                ||||| ||| |||| |||||| | |||| || |||||  | |||  ||||||||||| |||| || ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||| | ||| |  | |||||||||||||   |||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct:  2018101 ATATGCAGGAAGAATCTTATACAGGTCGAGTCAAAGAATTGGAGATAGATGTGAAAAAGATGTTAATTGAGATGGAAAATTCTTTAATTCAACTTGAACTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGTTTTGAGGATGAAATAAATACTATTTTGAAAGAAAAATATATTAATATGATCAATAACCCTAATTATAATAATTTATATGTCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGCTATGCAGTACCTCAAG 2018370

HSP 7 Score: 220.872 bits (119), Expect = 4.922e-55
Identity = 203/241 (84.23%), Postives = 203/241 (84.23%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGG 1471
                ||||| |||||||||| |||||||||||||  |||||||||| |||||||||  ||||||| |||||| ||||| |||| ||||| | || || |||||||||||||  ||  ||    |  | |  ||    ||| | |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct:  2423034 CAAGAGGCAAAATGGTTCTATAGTGGATACCAACCAACATTGCAAGAATATACTGAAAATGCTTGGATTTCAGTAGGAGGACCAGCTTTTCTTATGCATGCTTATTT--CT-GTT----T--T-ACCAA----TCTCA-TAACAAATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCGGATGATCTAGGAACATGTTCGG 2422809

HSP 8 Score: 206.098 bits (111), Expect = 1.378e-50
Identity = 133/144 (92.36%), Postives = 133/144 (92.36%), Query Frame = 1

Query:     1060 AGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACG 1203
                ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||| | ||||||||| |||| || ||||||||||||||||| ||||||||||||
Sbjct:  2035501 AGATGGGATGTGAAAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTATCTTGTTTTACACAATACCATAAATGATATGGTATTTGAGGTGTTAAGAGACCAAGAAATTTCCATCAACATTCAATACCTTAAGAAAACG 2035644

HSP 9 Score: 196.865 bits (106), Expect = 8.295e-48
Identity = 138/154 (89.61%), Postives = 138/154 (89.61%), Query Frame = 1

Query:     1203 GTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAAT 1356
                |||| | |||||||||| | ||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| || |||||||||||||||||| |||  |||||||||||
Sbjct:  2036267 GTGGGTCGATATGTGTAAAAGTTTCTTGCAAGAGGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTAGGAGCACCAGTTATTCTTGTGCATGCTTATTTTTTTCACGCAAATAATAAT 2036420

HSP 10 Score: 187.632 bits (101), Expect = 4.992e-45
Identity = 181/221 (81.90%), Postives = 181/221 (81.90%), Query Frame = 1

Query:      841 AGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                ||||||||||| ||||| |||||||| |||||| || ||||    |||||| |||| ||||| |||||||||||||  || ||| ||  || ||||||| ||   || |||| ||||| ||   |||  | ||||||||  |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||
Sbjct:  2396996 AGGTGGTGGAGCCATACAAAACTTGGAGAGAAAATGGATTTCTTTAGAGATAGATTAATGGAGTGTTTCTTATGGACTGTGGGAATAGCATGTGAGCCAGAAAAAAGCTATTATAGAAGAATGTCTGGAAGATTATATGTTCTAATAACAACAATTGATGATATATATGATGTTTATGGAACATTGGAGGAATTAGAGCTTTTCACTAATGCAGTTGAGAG 2396776

HSP 11 Score: 126.692 bits (68), Expect = 1.104e-26
Identity = 182/235 (77.45%), Postives = 182/235 (77.45%), Query Frame = 1

Query:     1231 CAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACAT 1465
                ||||| ||||||||||  ||||||||||||| |||||||||| |||||||| | || ||||| ||| | || ||||||| || |||| || || |||||||  || |||| | ||    |  | | |||  |  ||  ||| |  | || | | |||||||||| ||||| ||| |||| || || ||||| |||| |||  |||||||||||||||||||||||||||||||||
Sbjct:  2426507 CAAGAGGCAAAATGGTTTTATAGTGGATACAAACCAACATTGCAAGAATATGTTGAGAATGGATGGTTGTCTGTGGGAGGACAAGTTATTCTTATGCATGC--ATATTTCGC-TT----T--T-ACAAA--T-CCT--GTTACCAAAGAGGCATTGGAATGTCTAAAAGACGGTCATCCTAACATAGTTCGCCATGCATCGATAATATTACGACTTGCAGATGATCTAGGAACAT 2426288

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BLAST of TPS41 vs. Genbank
Match Name: NW_022060378.1
Description: Cannabis sativa unplaced genomic scaffold, cs10 ctgX15, whole genome shotgun sequence

HSP 1 Score: 477.556 bits (258), Expect = 2.645e-132
Identity = 368/420 (87.62%), Postives = 368/420 (87.62%), Query Frame = 1

Query:      432 AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAG-AAAAGAAATTAATGATTGATAATGATTATGATTAT------AATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGT 844
                ||||| ||||||| |||| |||||||||||||||||||||||  |||||||||   ||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||   ||  |||| || ||||||| |||||||||||   || |||| ||||| |||||| ||||| |||||||||||      ||| | ||||||||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||||||||||||   |||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct:   197143 AGAGACTTTTAATTATTTCAAGGACGAGACAGGAAAATTCAAAACAAACATAA---GTGGTGATATCATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAAAAAAAAGGCGAAAGCATTTTAGAGGAAGCTAGAATTTTCACAACTGAACGTCTCAAAAACTACACAATAATGATATC-AGAGCAAAATAAATTGATGATTAATAATAATTATGATTATTATTACAATATTGAAGTAGTGAATCATGCTTTGGAGCTCCCACTTCATCGAAGGACCACAAGAATAGAAGCTAAGTGGTTCATCGATATGTACAAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCCAAACTCGATTTCAACATGATACAATCAACACATCATGAAGATTTGAAACATATATTCAGGT 196728

HSP 2 Score: 361.217 bits (195), Expect = 2.780e-97
Identity = 222/235 (94.47%), Postives = 222/235 (94.47%), Query Frame = 1

Query:      828 AAAACATAT-ATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAG 1061
                |||| |||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct:   196619 AAAATATATAATTAAGGTGGTGGAGGCATACTAAACTTGGTGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTTTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAACAACAACTGTCAAATTACTTGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTAGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAG 196385

HSP 3 Score: 316.897 bits (171), Expect = 6.102e-84
Identity = 239/270 (88.52%), Postives = 239/270 (88.52%), Query Frame = 1

Query:      176 AGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAAT------G------TTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAG 433
                ||||||||||||||| |||||| || ||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||      |      ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct:   197696 AGGGAGAACCTTATACAAGTCGAGTAAAAAAACTCGAGGAAGATGTGAAAAGGATGCTAGTTGAGATGGAAAACTCTTTAGCTCAACTTGAACTCATTGACACGTTACAAAGACTTGGAGTATCTTATCGTTTTGAGAATGAAATAAATACTATTTTAAAAGAAAAATATGTCAATATTAATGGTAATATTAATAACCCTAATTATAATTTATATGCCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGTTATGCTGTACCTCAAG 197427

HSP 4 Score: 257.805 bits (139), Expect = 3.752e-66
Identity = 151/157 (96.18%), Postives = 151/157 (96.18%), Query Frame = 1

Query:     1203 GTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAA 1359
                |||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct:   193681 GTGGGTAGATATGTGTAGATGTTTTCTACAAGAAGCAAAATGGTACTACAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTGGGAGCACCAGTCCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAA 193525

HSP 5 Score: 189.479 bits (102), Expect = 1.388e-45
Identity = 132/146 (90.41%), Postives = 132/146 (90.41%), Query Frame = 1

Query:     1060 AGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGA-CAAAGACATCTCCATCAACATTCAATAACTTAA-GAAAACG 1203
                ||||||||||||  |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||  | ||| ||||||| |||||||| ||||| |||||||
Sbjct:   195279 AGATGGGATGTGGAAATGATAAATGAATTACCAGAATACATGAAGATGCCTTATATTGTTTTACACAATACAATAAATGAAATGGTATTTGAGATATTAAGAGATCAACAA-ATCACCATCAAAATTCAATA-CTTAAAGAAAACG 195136


Match Name	Summary
NC_044374.1	E-Value: 2.535e-162, PID: 91.71 Description: Cannabis sativa chromosome 5, cs10, whole genome shotgun sequence [more]
NW_022060378.1	E-Value: 2.645e-132, PID: 87.62 Description: Cannabis sativa unplaced genomic scaffold, cs10 ctgX15, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of TPS41 vs. Genbank
Match Name: XM_030645438.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115716604), mRNA

HSP 1 Score: 1847.77 bits (1000), Expect = 0.000e+0
Identity = 1392/1580 (88.10%), Postives = 1392/1580 (88.10%), Query Frame = 1

Query:       45 ATCAAGTGCTTGCTACCCCATTCA-ATGTACTGTAGTCGATAGTTCTAATCCAATGATCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATAT-GTCA-ATG-TTAATAACCCTAATT---ATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAG-ACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTAT-A--AT--T-TCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAA-ACTTGTCTA-AGTTTCAGATGAAGA-AGTG--GAATGTCTTAAAGAGGG---TTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGA 1601
                ||||||||| ||||||||||| || |||| |||| ||| ||||||||||| |||| || ||||||||||| | ||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||| ||| |||| |||||| | |||| || |||||  | |||  ||||||||||| |||| || ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||  | | ||| | |||||||||||||   |||||||||| | || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   |||||||  ||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||| |||||||| |  ||  | ||||| |||||||||| || || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| || |||||||| ||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| | |||||||||||  ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||| ||||| | ||  || || |  |  || | |||| | |   |||||  || || | ||   |||||||   ||  |||| ||| |  || |||||||||||||| || |||| |||| |||||  ||||| ||| |||||||||| |||| ||| ||||||||||||||||| ||||| || |     || ||||| ||  |||||||||| || || |||  ||| ||||| |||  |||||| ||||||||||||||
Sbjct:      153 ATCAAGTGCATGCTACCCCAT-CATATGTGCTGTGGTCAATAGTTCTAATGCAATTATTGATCGACGATCTGCCAACTTTGAGCCCTCCATTTGGTCTTTTGATTATATTCAATCTCTTACAAGCCAATATAAGGAAGAATCTTATACAGGTCGAGTCAAAGAATTGGAGATAGATGTGAAAAAGATGTTAATTGAGATGGAAAATTCTTTAATTCAACTTGAACTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGTTTTGAGGATGAAATAAATACTATTTTGAAAGAAAAATATATTAATATGATCAATAACCCTAATTATAATAATTTATATGTCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGCTATGCAGTACCTCAAGAGATTTTTAATCATTTTAAGGACGAGATAGGAAAAATCAAAACGAACATGATTAGTGATGATATTATGGAAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAAGAAGTTAGAATTTTCACAACTCAATATCT-AAAGAACTACATTATAATGATATCACAAGAAA-GAAAGTTAATGATTGATAATGATAATGATTATGATTATGATATCGAAATAGTGAATCACGCTTTGGAGCTCCCACTTCATCGGAGGACTACAAGAACAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGACGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAATTTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAAATTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAATAACAACTGCCAAATTATTTGAGCTAATAACAGTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAGATGGGATATGGAAATGATAAATGAGTTACCAGAATATATGAAGATGCCTTATATTGTTTTACACAATACCATTAATGAAATGGTATTTGAGGTATTAAGAGACCAACACATCTCCATCAACATTCAATACCTTAAGAAAACGTGGGTAGATATGTGTAGAGGTTTTTTACAAGAGGCAAAATGGTACTATAGTGGATATACACCAACACTAGAAGAATATATTAAAAATGGTTGGATTTCAGTGGGAGCACCGGTTCTAATTGTGCATGCTTATTTTTCTCATGCAAATTATAATCACACA-GT-TACAAGT--AG-TAAAGAGATTTTCGAATGCTTTGAACATGGTTATTATCCCGCCATAATTCGTCATAGTGCCATAATATTACGACTTACAAATGACCTAGCAACATCATCGGAGGAACTGAAAAGAGGTGATGCTCCGACATCAATTCAATGTTATATGCAAGAAAAAAAAGTATCTGAGGAGAAAGCTCGTGAACATATTAAGTTTTTAATAAGTGAAATATGGAAAGAGATGAATAATGA 1724

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BLAST of TPS41 vs. Genbank
Match Name: XM_030645439.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115716605), mRNA

HSP 1 Score: 1783.14 bits (965), Expect = 0.000e+0
Identity = 1403/1615 (86.87%), Postives = 1403/1615 (86.87%), Query Frame = 1

Query:        1 AATTATAATTTTGTTAGTAGTA---CTACAAGATCAAGATTATCAAGATCAAGTGCTTGCTACCCCATTCAATGTACTGTAGTCGATAGTTCTAATCCAATGATCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAATGTTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAGAAAAGAAA-TTAATGATTGATAATGATTATGATTATAATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATG--AA-GA-AGTG--GAATGTCTTA-AAGAGGGTTATC--CCAAT-ATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGA 1601
                ||||||||| || ||| || ||   |||||| |||||||||      ||||||||| ||||||||||| |||||| |||| ||| ||||||||||| |||| || ||||||||||| | ||||| ||| || |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| |||||| |||||| |  | ||| |||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| || |||||||||||||||| | ||||||||||  |||||||||| ||| ||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| || |||  ||||   | |||||| | || ||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| ||  |||| |||| || |||||||||||||||||||   || ||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| || || |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||| |||||||||| || |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||| | ||||||||| |||| || ||||||||||||||||| ||||||||||||||| | |||||||||| | ||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| || |||||||||||||||||| |||  |||||||||||   | |  | || || || ||   || || | |   ||||| |||  || | ||||||   ||    ||| |||| ||  |  || ||||||||||| || || |||| |||| |||||  ||||| ||| |||||||||| |||| ||| ||||||||||||||||||||||| || |    ||| |||||||| ||||||||||| ||  | |||  ||| ||||  ||| ||||||||||||||||||||||
Sbjct:      144 AATTATAATATTATTAATAATAATGCTACAAAATCAAGATT------ATCAAGTGCATGCTACCCCATCCAATGTGCTGTGGTCAATAGTTCTAATGCAATTATTGATCGACGATCTGCCAACTTTGAGCCCTCCATTTGGTCTTTTGATTATATTCAATCTCTTACAAGTCAATATAAGGGAGAACCTTATACAAGTCGAGTGAAAAAACTTGAGAGAGATGTGAAAAAGATGTTAGTTGAGATGGAAAACTCTTTAGCTCAACTTGAACTCATTGATACATTGCAAAGACTTGGAATATCTTACCGTTTTGAGAATGAAATAAATTCTATTTTGAACAAAAAATATGTTAATATTAATAATCCTAATTATAATTTATATGCCATTGCTCTTCAATTTAGGCTTCTACGTCAACATGGCTATGCAGTACCTCAAGAGATTTTTAATCAGTTGAAGGACGAGATAGAAAACATCAAAAAACACATAAATGGTAATGATATCATGGGAGTATTAGCCTTATACGAAGCTTCTTTTTATGAGAAAAAAGGCGAAAGTATTTTAAAGGAAGCTAGAATTTTCACAACTAAATGTCTCAAAAACTACACTATAATGATATC-AGAGCAAAAAAAGTTAATGATTGATAATGATTATGATTATGATATCGAAGTAGTGAATCATGCCTTAGAGCTCCCACTTCATCGGAGGACCACAAGAACAGAAGCAAAGTGGTTCATTGACGCATATGCGAAAAAACAAGACATGAATCCTATGTTGCTTGAGTTAGCCAAACTCGATTTCAACATAGTACAATCAACACATCATGAAGATCTAAAACATATATTCAGGTGGTGGAGACATACTAAACTTGGAGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAATATTGGAATAAGATTTGAGTCAAAATTCAGCTATTTTAGAACAAAAACTGCCAAATTATTTGAGCTAGTAACATTTATAGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGAAAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTATCTTGTTTTACACAATACCATAAATGATATGGTATTTGAGGTGTTAAGAGACCAAGAAATTTCCATCAACATTCAATACCTTAAGAAAACGTGGGTCGATATGTGTAAAAGTTTCTTGCAAGAGGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTAGGAGCACCAGTTATTCTTGTGCATGCTTATTTTTTTCACGCAAATAATAAT---CGTA-C-AA-TTACAAATACTAAAGAGATTTTCGAATG-CTTGGAATATGGTTATTATCCTGCCATTATTCGTCACAGTGCCATAATATTACGATTTACAAATGACCTAGCAACATCATCGGAGGAATTGAAAAGAGGTGATGCTCCGACATCAATTCAATGTTACATGCAAGAAAAAAATGTATCTGAAGAGGAAGCTCGTGAACATGTTAAGTTTTTAATAAATGAAGCATGGAAGGAGATGAATAATGA 1744

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BLAST of TPS41 vs. Genbank
Match Name: XM_030629489.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X2, mRNA

HSP 1 Score: 1685.26 bits (912), Expect = 0.000e+0
Identity = 1343/1546 (86.87%), Postives = 1343/1546 (86.87%), Query Frame = 1

Query:       77 TAGTCGATAGTTCTAAT-CCAATGATCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAAT-------G-----TTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAG-AAAAGAAATTAATGATTGATAATGATTATGATTAT------AATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTT-AAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAA--TGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGG-TGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAA 1598
                |||| |||||||||  | | ||| || | |||| |||| | ||||| ||||||||||||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||| |||||| || ||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||       |     ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||  ||||||||   |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||   ||  |||| || ||||||| |||||||||||   || |||| ||||| |||||| ||||| |||||||||||      ||| | ||||||||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||||||||||||   |||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||  || | ||| ||||||| |||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    | |   ||| | |||      |||||  ||  |||       |||||| |  ||  |||| ||  | ||| ||||| |||||||| || |||| |||| |||||  || || ||| | |||||||| |||| ||| || |||||||||||||||||||| || |     | | | |||||| ||||||||||| || || |||  ||| ||||| ||| | |||||||||||||||||
Sbjct:       92 TAGT-GATAGTTCTGTTACTAAT-ATTGTTCGAAGATCAGCCAACTTTGAACCATCCATTTGGTCTTTTGATTTCGTTCAGTCTCTTTCAAGCAAATATAAGGGAGAACCTTATACAAGTCGAGTAAAAAAACTCGAGGAAGATGTGAAAAGGATGCTAGTTGAGATGGAAAACTCTTTAGCTCAACTTGAACTCATTGACACGTTACAAAGACTTGGAGTATCTTATCGTTTTGAGAATGAAATAAATACTATTTTAAAAGAAAAATATGTCAATATTAATGGTAATATTAATAACCCTAATTATAATTTATATGCCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGTTATGCTGTACCTCAAGAGACTTTTAATTATTTCAAGGACGAGACAGGAAAATTCAAAACAAACATA---AGTGGTGATATCATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAAAAAAAAGGCGAAAGCATTTTAGAGGAAGCTAGAATTTTCACAACTGAACGTCTCAAAAACTACACAATAATGATATC-AGAGCAAAATAAATTGATGATTAATAATAATTATGATTATTATTACAATATTGAAGTAGTGAATCATGCTTTGGAGCTCCCACTTCATCGAAGGACCACAAGAATAGAAGCTAAGTGGTTCATCGATATGTACAAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCCAAACTCGATTTCAACATGATACAATCAACACATCATGAAGATTTGAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGTGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTTTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAACAACAACTGTCAAATTACTTGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTAGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAGATGGGATGTGGAAATGATAAATGAATTACCAGAATACATGAAGATGCCTTATATTGTTTTACACAATACAATAAATGAAATGGTATTTGAGATATTAAGAGATCAACAAATCACCATCAAAATTCAATA-CTTAAAGAAAACGTGGGTAGATATGTGTAGATGTTTTCTACAAGAAGCAAAATGGTACTACAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTGGGAGCACCAGTCCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAAGAGAT-T---TTTGA-ATGTT----TGGAACATGG-TTA-------TTATCCTACCATAATTCGTCACAGTTCCATAATAATACGACTTACAAATGACCTAGCAACATCATCTGAGGAACT-AAAAGAGGTGATGCTCCGACGTCAATTCAATGTTACATGCAAGAAAAAAAATATATGTGAAGAGGAAGCTCGTGAACATATTAAGTTTTTAATAAGTGAAGCGTGGAAGGAGATGAATAA 1612

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BLAST of TPS41 vs. Genbank
Match Name: XM_030629488.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X1, mRNA

HSP 1 Score: 1672.34 bits (905), Expect = 0.000e+0
Identity = 1343/1549 (86.70%), Postives = 1343/1549 (86.70%), Query Frame = 1

Query:       77 TAGTCGATAGTTCTAAT-CCAATGATCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAAT-------G-----TTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCA---AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAG-AAAAGAAATTAATGATTGATAATGATTATGATTAT------AATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTT-AAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAA--TGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGG-TGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAA 1598
                |||| |||||||||  | | ||| || | |||| |||| | ||||| ||||||||||||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||| |||||| || ||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||       |     ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||   ||||| ||||||| |||| |||||||||||||||||||||||  ||||||||   |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||   ||  |||| || ||||||| |||||||||||   || |||| ||||| |||||| ||||| |||||||||||      ||| | ||||||||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||||||||||||   |||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||  || | ||| ||||||| |||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    | |   ||| | |||      |||||  ||  |||       |||||| |  ||  |||| ||  | ||| ||||| |||||||| || |||| |||| |||||  || || ||| | |||||||| |||| ||| || |||||||||||||||||||| || |     | | | |||||| ||||||||||| || || |||  ||| ||||| ||| | |||||||||||||||||
Sbjct:       94 TAGT-GATAGTTCTGTTACTAAT-ATTGTTCGAAGATCAGCCAACTTTGAACCATCCATTTGGTCTTTTGATTTCGTTCAGTCTCTTTCAAGCAAATATAAGGGAGAACCTTATACAAGTCGAGTAAAAAAACTCGAGGAAGATGTGAAAAGGATGCTAGTTGAGATGGAAAACTCTTTAGCTCAACTTGAACTCATTGACACGTTACAAAGACTTGGAGTATCTTATCGTTTTGAGAATGAAATAAATACTATTTTAAAAGAAAAATATGTCAATATTAATGGTAATATTAATAACCCTAATTATAATTTATATGCCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGTTATGCTGTACCTCAAGCAGAGACTTTTAATTATTTCAAGGACGAGACAGGAAAATTCAAAACAAACATA---AGTGGTGATATCATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAAAAAAAAGGCGAAAGCATTTTAGAGGAAGCTAGAATTTTCACAACTGAACGTCTCAAAAACTACACAATAATGATATC-AGAGCAAAATAAATTGATGATTAATAATAATTATGATTATTATTACAATATTGAAGTAGTGAATCATGCTTTGGAGCTCCCACTTCATCGAAGGACCACAAGAATAGAAGCTAAGTGGTTCATCGATATGTACAAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCCAAACTCGATTTCAACATGATACAATCAACACATCATGAAGATTTGAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGTGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTTTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAACAACAACTGTCAAATTACTTGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTAGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAGATGGGATGTGGAAATGATAAATGAATTACCAGAATACATGAAGATGCCTTATATTGTTTTACACAATACAATAAATGAAATGGTATTTGAGATATTAAGAGATCAACAAATCACCATCAAAATTCAATA-CTTAAAGAAAACGTGGGTAGATATGTGTAGATGTTTTCTACAAGAAGCAAAATGGTACTACAGTGGATACACACCAACATTGGAAGAATATATTGAAAATGGTTGGATTTCAGTGGGAGCACCAGTCCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAAGAGAT-T---TTTGA-ATGTT----TGGAACATGG-TTA-------TTATCCTACCATAATTCGTCACAGTTCCATAATAATACGACTTACAAATGACCTAGCAACATCATCTGAGGAACT-AAAAGAGGTGATGCTCCGACGTCAATTCAATGTTACATGCAAGAAAAAAAATATATGTGAAGAGGAAGCTCGTGAACATATTAAGTTTTTAATAAGTGAAGCGTGGAAGGAGATGAATAA 1617

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BLAST of TPS41 vs. Genbank
Match Name: XM_030629490.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X3, mRNA

HSP 1 Score: 1387.95 bits (751), Expect = 0.000e+0
Identity = 1024/1152 (88.89%), Postives = 1024/1152 (88.89%), Query Frame = 1

Query:       77 TAGTCGATAGTTCTAAT-CCAATGATCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAAT-------G-----TTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCA---AGAGATTTTTAATCATTTTAAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAG-AAAAGAAATTAATGATTGATAATGATTATGATTAT------AATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGA-CAAAGACATCTCCATCAACATTCAATAACTTAA-GAAAACG 1203
                |||| |||||||||  | | ||| || | |||| |||| | ||||| ||||||||||||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||| |||||| || ||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||       |     ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||   ||||| ||||||| |||| |||||||||||||||||||||||  ||||||||   |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||   ||  |||| || ||||||| |||||||||||   || |||| ||||| |||||| ||||| |||||||||||      ||| | ||||||||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||||||||||||   |||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||  | ||| ||||||| |||||||| ||||| |||||||
Sbjct:       98 TAGT-GATAGTTCTGTTACTAAT-ATTGTTCGAAGATCAGCCAACTTTGAACCATCCATTTGGTCTTTTGATTTCGTTCAGTCTCTTTCAAGCAAATATAAGGGAGAACCTTATACAAGTCGAGTAAAAAAACTCGAGGAAGATGTGAAAAGGATGCTAGTTGAGATGGAAAACTCTTTAGCTCAACTTGAACTCATTGACACGTTACAAAGACTTGGAGTATCTTATCGTTTTGAGAATGAAATAAATACTATTTTAAAAGAAAAATATGTCAATATTAATGGTAATATTAATAACCCTAATTATAATTTATATGCCACTGCTCTTGAATTTAGGCTTCTACGTCAACATGGTTATGCTGTACCTCAAGCAGAGACTTTTAATTATTTCAAGGACGAGACAGGAAAATTCAAAACAAACATA---AGTGGTGATATCATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAAAAAAAAGGCGAAAGCATTTTAGAGGAAGCTAGAATTTTCACAACTGAACGTCTCAAAAACTACACAATAATGATATC-AGAGCAAAATAAATTGATGATTAATAATAATTATGATTATTATTACAATATTGAAGTAGTGAATCATGCTTTGGAGCTCCCACTTCATCGAAGGACCACAAGAATAGAAGCTAAGTGGTTCATCGATATGTACAAGAAAAAACAAGACATGAATCCTATTTTGCTTGAGTTTGCCAAACTCGATTTCAACATGATACAATCAACACATCATGAAGATTTGAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGTGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTTTTATGGAAAGTTGGAATAAGATTTGAGCCAAAATTCAGTTATTTTAGAACAACAACTGTCAAATTACTTGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTAGATGAATTAGAGCTTTTCACCAAAGCTATTGAGAGATGGGATGTGGAAATGATAAATGAATTACCAGAATACATGAAGATGCCTTATATTGTTTTACACAATACAATAAATGAAATGGTATTTGAGATATTAAGAGATCAACAA-ATCACCATCAAAATTCAATA-CTTAAAGAAAACG 1241

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BLAST of TPS41 vs. Genbank
Match Name: XM_030644768.1
Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716064), transcript variant X1, mRNA

HSP 1 Score: 1072.18 bits (580), Expect = 0.000e+0
Identity = 1383/1763 (78.45%), Postives = 1383/1763 (78.45%), Query Frame = 1

Query:       39 ATCAAGATCAAGTGCTTGCTACCCCATTCAATGTACTGTAGTCGATA------GTTCTA--A-T-CCAATGAT--CGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTG-AGATGGAAAATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAAT-GT--TAATAACCCT-A----ATT-A-TA--ATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTT---AAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTACACTATAATGATATCGCAAGAAAAGAAATTAATGATTGATAATGATTATGATTATAATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACG---CGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTC-AGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGA-TAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTAC--ACAATACAATAAATGAAATAGTATTTGAGATATT--AAGAGACAAAGACATCTCCATCAACATTCAATAACTT-AAGAAAACG-TGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCTTTCCCC 1761
                ||| ||||||||| ||||||||||||| ||||||||||| |||||||      ||||||  | | | ||| ||   |||||| |||| | |||||||| |||  |||||||||||||||||| | |||| |||||| ||| ||||||| |||| ||| |||||| ||||||  | ||  || | |||  ||||||||||||||||||| ||| || ||||||| |||||||| |||||||| || ||||| ||| | |||||||||||| |||||||||| ||||| |||||||| | | |||||||||| |||||||    ||||  |  ||| |||||| |    ||| | ||  ||||||| || | ||||||  ||||||| |||||||| ||| |||| | || |||||||||||| ||||| ||| |||||   ||  || |||||||| | |||||||||||  | || ||| ||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| || ||||||||||| || ||||| |||||||||| || ||||| |||| || |  | || | ||| | ||  ||||   || || |||| | | || ||||  || | ||| | ||   | ||||||||||||| || ||| | |||||||| ||||| |  ||||||  ||||||||| ||||| || || |     ||||| | |||||||||||||||||| | ||| ||||| ||||| ||| | |||||||| ||| | ||||||||| |||| || || || |||  ||   || |||||||||| | || |||||||||| |||||||||  ||| |  |||||| ||||| |||| |||||||||||| | ||||||||||||||||||||| |||||||||| ||||||| ||    | | ||| | ||||  ||| ||||| |||||||||||||  ||||  |||||||||||||||| ||| || | |||||||| || ||| || | ||||||||| ||| ||  | || || |||||||||| || |||||||   | |||| |  |||||  |||||   | ||||||| | | ||||||  ||||  |||| || | |   | |   || ||||| ||| |||| ||||||  | ||| ||||  |||||| |  |  | | ||||| ||||||||||  ||||||||||||| |||||||||| |||||||| | || ||||| ||| | || ||||||| || |||| || || |||||||  || |||| | ||    |  | | |||  |  ||  ||| |  | || | | |||||||||| ||||| ||| |||| || || ||||| |||| |||  |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||||| ||||| ||  ||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| |||| |||||| ||||| ||  |||| |   || ||||||| |||| |||||
Sbjct:      215 ATCGAGATCAAGTACTTGCTACCCCATACAATGTACTGTGGTCGATAACCCTAGTTCTACGATTACTAATAATAGTGATCGAAGATCAGCCAACTATGGACCTCCCATTTGGTCTTTTGATTTTGTTCAATCTCTTCCAATCCAATATAAGGGTGAATCTTATACAAGTCGATTAAATAAGTTGGAGAAAGATGTGAAAAGGATGCTAATTGGAG-TGGAAAACTCTTTAGCCCAACTTGAACTAATTGATACAATACAAAGACTTGGAATATCTTATCGTTTTGAAAATGAAATCATTTCTATTTTGAAAGAAAAATTCACCAATAATAATAACAACCCTAATCCTATTAATTATGATTTATATGCTACTGCTCTCCAATTTAGGCTTCTACGCCAATATGGATTTGAAGTACCTCAAGAAATTTTCAATAATTTTAAAAATCACAAGACAGGAGAGTTCAAGGCAAA--T-ATAAGTAATGATATTATGGGAGCATTGGGCTTATATGAAGCTTCATTCCATGGGAAAAAGGGTGAAAGTATTTTGGAAGAAGCAAGAATTTTCACAACAAAATGTCTC-AA-AAAATAC-A-AATTA-ATGTCAAG--TAGTAA-TAAT-AATAAT-ATGA-CATTAATATCA-TT---ATTAGTGAATCATGCTTTGGAGATGCCACTTCAATGGAGAATCACAAGATCAGAAGCTAAATGGTTTATTGAAGAAATATATGAAAGAAAACAAGACATGAATCCAACTTTACTTGAGTTTGCCAAATTGGATTTCAATATGCTGCAATCAACATATCAAGAGGAGCTCAAA-GTACTCTCTAGGTGGTGGAAGGATTCTAAACTTGGAGAGAAATTGCCTTTCGTTAGAGATAGATTGGTGGAGTGTTTCTTATGGCAAGTTGGAGTAAGATTTGAGCCACAATTCAGTTACTTTAGAATAATGGATACAAAACTCTATGTTCTATTAACAATAATTGATGATATGCATGACATTTATGGAACATTGGAGGAACTACAACTTTTCACTAATGCTCTTCAAAGATGGGATTTGA-AAGAATTAGATAAGTTACCAGATTATATGAAGACAGC-TTTC-TACTTTACATACAATTTCACAAATGAATTGGCATTTGATGTATTACAAGA-AC-ATG--GTTTTGTTC-ACATTGAAT-ACTTCAAGAAACTGATGG-TAGAGTTGTGTAAACATCATTTGCAAGAGGCAAAATGGTTTTATAGTGGATACAAACCAACATTGCAAGAATATGTTGAGAATGGATGGTTGTCTGTGGGAGGACAAGTTATTCTTATGCATGC--ATATTTCGC-TT----T--T-ACAAA--T-CCT--GTTACCAAAGAGGCATTGGAATGTCTAAAAGACGGTCATCCTAACATAGTTCGCCATGCATCGATAATATTACGACTTGCAGATGATCTAGGAACATTGTCGGATGAACTGAAAAGAGGCGATGTTCCTAAATCAATTCAATGTTATATGCACGATACTGGTGCTTCTGAAGATGAAGCTCGTGAGCACATAAAATATTTAATAAGTGAATCATGGAAGGAGATGAATAATGAAGATGGAAATATTAACTCTTTTTTCTCAAATGAATTTGTTCAAGTTTGCAAAAATCTTGGTAGAGCGTCACAATTCATGTATCAGTATGGCGATGGACATGCTTCTCAGAATAATCTATCGAAAGAGCGCGTTTT-AGGGTTGATTATTACTCCTATCCCC 1931

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BLAST of TPS41 vs. Genbank
Match Name: XM_030644770.1
Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716066), mRNA

HSP 1 Score: 935.525 bits (506), Expect = 0.000e+0
Identity = 793/931 (85.18%), Postives = 793/931 (85.18%), Query Frame = 1

Query:      833 ATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGC-CAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTT-AAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 1761
                ||||||  |||||||||| |||| |||||||||| |||||||||  ||| |  |||||| |||||||||| |||||| | ||| | |||||| |||||||||||||| |||||||||| ||||||| ||   || | |||| | ||||  ||||| ||| |||||||||||||  ||||  | |||| ||| ||||| ||| || | |||||| | || ||| || | || |||||| ||| | | ||| |||||||||| || |||||||||||| |||| ||  ||||| |||||   | ||||||||| || ||| |  ||||| ||||  | |   | |   | ||| || |||| ||| ||||||  ||||||||| || |||| |  |    | ||||| |||||||||| |||||||||||||  |||||||||| |||||||||  ||||||| |||||| ||||| |||| ||||| | || || |||||||||||||  ||  ||    |  | |  ||    ||| | |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      113 ATATATAAAGGTGGTGGAAGCATTCTAAACTTGGAGAGAAATTGCCTTTCGTTAGAGATAGATTGATGGAGTGTTTCATGTGGCAAGTTGGAATAAGATTTGAGCCAGAATTCAGTTACTTTAGAATAATTGCTACACAAA-TCTATGTTCTAATCACAATAATTGATGATATGCATGACATATATGCAACTTTGGAGGAACTACAACTTTTCGCTAATGCTCTTCAAAGGTGGGATTTGAAAGTAATAGATGAGTTACCGGATTACATGAAGATGGCTTTCCTCATTTTATACAATTTCACAAATGAAATGGTGTTTAATGTATTAGGAGAACATG--GT-TTTGTTAACCTTGAATA-CTTCAAGAAATTGTGGATAGACATATGTAAACATCAATTGCAAGAGGCAAAATGGTTCTATAGTGGATACCAACCAACATTGCAAGAATATACTGAAAATGCTTGGATTTCAGTAGGAGGACCAGCTTTTCTTATGCATGCTTATTT--CT-GTT----T--T-ACCAA----TCTCA-TAACAAATGAAGAAGTGGAATGTCTTAAAGAGGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCGGATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTATTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATTTACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTAATCCTTTCCCC 1023

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BLAST of TPS41 vs. Genbank
Match Name: XM_030644559.1
Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115715884), transcript variant X1, mRNA

HSP 1 Score: 896.745 bits (485), Expect = 0.000e+0
Identity = 1300/1691 (76.88%), Postives = 1300/1691 (76.88%), Query Frame = 1

Query:      110 GATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTATATTCAGTCTCTT--A-CAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGTGAAAGAGATCGAGGGAGATGTGAAA-AG-GA-TGCTAGTTGAGATGGAA---AATTCTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCTTATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATA-T--GTCAATGTTA---ATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGACTTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTTAAGGACGAG---ACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTATGGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAAGTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAA---GAC-TA-C-ACTATAATGAT--ATCGCAAGAAA--A-GA-AATTAATGATTGATAATGATTATGATTATAAT---TTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGAGGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAACAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACATGATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGAGGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATGGAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTATTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATGATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAAGCTGTTGAGAGATGGGATGTGACAATG-ATAAATGAGTTACCAGAATACATGAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTGAGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAAACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTATAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCTCAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAATAATAATAAACTTGTCTAAGTTTCAGATGAAGA-AGTGGAATGTCTTAAAGAGGGTTATCC-CA-ATATTGTTCGACATGGATCCCTAATATTACGACTTGCAGATGATCTAGGAACAT-GTTCGGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATA-ATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCT-TTCC 1759
                |||| | ||| ||||||||  ||||||||||||||||||| ||||| ||||||  | ||||||||||| |||||||| | | || |||| |  |||| ||| | |||| | |||||||| ||  | || ||||||||||| ||   || |||||||||||||||||| | |||||  ||||||||||||||||| ||||||| || || |||| ||||||||  |||||||| || ||||| || |  |  ||| |||   ||||||||||||||||||| |||||||  ||||| ||||| || |||||||| || ||||||||||  ||| ||||||| ||||| |||   |||||||| |||   ||| | || ||||||||||  |  | | | || ||||| || ||||||||||| ||||| ||||||||||||||||  |||||| | ||||||||||| || ||||||||  ||| |  ||   ||| |||||||    || || | ||||| | |||  | || || |||  |  |  |||| | | |||| ||||| ||||| |||||   ||   | ||||||||||||| || ||||| |||||| ||||||| |  ||||||  |||||| | ||||||||| ||    ||||| ||||| ||  |||||||| ||| ||||||||||||||| ||| | |||| ||||||| ||||||| | | |||| || |||||||||||| | |  ||||||||||| ||||| |||||||| |||||| || ||||    |||||| |||| ||||| |||||||||||||  || ||| ||  || ||||||| ||   || |||| ||||| ||   |||  | ||||||||  |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||| ||   ||  |||| ||||||||||| |||| |||||||||  || ||||||||||||| ||||| ||||| |  || ||  | ||| || || || | || ||| ||||| || |||  |||||||  |||||| ||||| | |||| |  |    ||||||| ||||||||||   | |||||||||| ||||||||| |||||||| ||  | ||||  ||||| || ||   || |||  || || || || |||||||||| |||| || | | |||  |    ||    ||| | |  || ||   | |||||| |   |  | |  |||||| |  ||| | ||   |||| |||| | ||  |||||||| |||||||||||||||||| |    ||||||||||||||||| ||| |||| | ||||||||||||||||||| | ||||| |||||||||||||| |||||||| || || || |||  | | ||||| |||| ||||||||| || ||||||||| ||| | || ||  | ||| ||||||| ||| ||||| ||||   ||| |||||||||| ||||   |||||||||||||| ||||||||||||||||||||||||||  ||| | |||||||| |  | ||||  | |||| || ||||||| | ||||
Sbjct:      205 GATCAGCCAATTATGAACCTCCCATTTGGTCTTTTGATTACATTCAATCTCTTTCATCAAGCCAATATAAGGGAGAAACATGTACAAGTAGATTGAATGAGCTAGAGGCAAATGTGAAAGAGATATTGTTAGTTGAGATGAAATCTAACTCTTTAGCTCAACTTGAGTTTATTGATGCATTGCAAAGACTTGGATTATCTTACCGTTTCGAGACTGAAATAAACACTATTTTAAATGAAAAGTACTCCGGTAATATTATCGATAACCCTAATTATAATTTGTACGCCACAGCTCTCGAATTCAGGCTTCTACGCCATCATGGTTATGATGTATCTCAAGAAATTTTCAATGTGTTTAAGGATGAGATTACAAGCAAGTTCAAGGCAAGAACGAGTGGCGAAGATATAATTGGAGTATTGGCTTTATACGAAGCTTCATTCTATGGCAAAAAAAGTGAAAGTATTTTGGAAGAAGCTAGGGTTTCCTCAATCGAATGTCTCGAAAATTACGTAGCAACTATGACGATGGAGCGAAACAAACCATCATTATTAGTCAATGATTATGATGATGATAATAATATGTTATTATTAGTGAATCATGCCTTGGAGCTTCCACTTTATTGGAGAATAACAAGATCAGAAGCAAGGTGGTTCATTGATTTATATGAAAAAAATCATAACATGAATTCTACTTTGCTTGAATTTGCCAAATTGGATTACAACATGGTACAATCCATATATCAAGAAGATCTAAAACATCTCTCAAGGTGGTGGAGCCATACAAAACTTGGAGAGAAAATGGATTTCTTTAGAGATAGATTAATGGAGTGTTTCTTATGGACTGTGGGAATAGCATGTGAGCCAGAAAAAAGCTATTATAGAAGAATGTCTGGAAGATTATATGTTCTAATAACAACAATTGATGATATATATGATGTTTATGGAACATTGGAGGAATTAGAGCTTTTCACTAATGCAGTTGAGAGATGGGATGTGA-AAGCAATGGATGATTTACCAGAATATATGAGGATGCCTTTCTTTCTTTTACACAATACCATAAACGAAATGGCTTTCGATGTGTTAGGACACCAA-A-ATTTCC-TCAACGTTAAATTCCTTAAGAGGACGTGGGTAGATTTCTGTAAACATCAATTACAAGAGGCAAAATGGTTTCACAGTGGATACAAACCAACATTCGAAGAATACATTAACAATGCATGGATTTCGGTATCAGGACCGATTATTCTTATGGATGCTTATTTCTCTC-TT-ACA-AATCCTG---TTACAAAAGATGCC-ATAAATTTACTGGAAT-T---A--G-G--TTATCCACCCATAAT-TT-ACCATGCATCCATGATTCTACGACTTACAGATGATCTAGGAACATCGAAT-GATGAAATGAAAAGAGGTGATATTCCGAAATCAATTCAATGTTACATGAACGATACAGGTGTTTCTGAAGATGAAGCTCGAGATCATATGAAGTTTCTAATAAGTGAATTATGGAAGGAAATAAATAATGAAGATGAAAAT-ATGGACTCTCCTTTCTCAAAACAATTTCTTCAAAATTGTAAAAATCTTGCTAGAATATCACAATTTATATATCAATATGGAGATGGACATGCTTCTCAGGATAGTTTATCAAAACAAAGAATTTC-AGAATTGATAATTAATCATATTCC 1870

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BLAST of TPS41 vs. Genbank
Match Name: XM_030644769.1
Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716064), transcript variant X2, mRNA

HSP 1 Score: 329.824 bits (178), Expect = 5.846e-89
Identity = 255/293 (87.03%), Postives = 255/293 (87.03%), Query Frame = 1

Query:     1470 GGATGAAATGAAAAGAGGCGATGTTCCTACATCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCGTGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATGAAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGCAAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACATGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATT-ATTATTAATCCTTTCCCC 1761
                ||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||||| ||||| ||  ||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| |||| |||||| ||||| ||  |||| |   || ||||||| |||| |||||
Sbjct:     1388 GGATGAACTGAAAAGAGGCGATGTTCCTAAATCAATTCAATGTTATATGCACGATACTGGTGCTTCTGAAGATGAAGCTCGTGAGCACATAAAATATTTAATAAGTGAATCATGGAAGGAGATGAATAATGAAGATGGAAATATTAACTCTTTTTTCTCAAATGAATTTGTTCAAGTTTGCAAAAATCTTGGTAGAGCGTCACAATTCATGTATCAGTATGGCGATGGACATGCTTCTCAGAATAATCTATCGAAAGAGCGCGTTTT-AGGGTTGATTATTACTCCTATCCCC 1679


Match Name	Summary
XM_030645438.1	E-Value: 0.000e+0, PID: 88.10 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115716604), mRNA [more]
XM_030645439.1	E-Value: 0.000e+0, PID: 86.87 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115716605), mRNA [more]
XM_030629489.1	E-Value: 0.000e+0, PID: 86.87 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X2, mRNA [more]
XM_030629488.1	E-Value: 0.000e+0, PID: 86.70 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X1, mRNA [more]
XM_030629490.1	E-Value: 0.000e+0, PID: 88.89 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115702029), transcript variant X3, mRNA [more]
XM_030644768.1	E-Value: 0.000e+0, PID: 78.45 Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716064), transcript variant X1, mRNA [more]
XM_030644770.1	E-Value: 0.000e+0, PID: 85.18 Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716066), mRNA [more]
XM_030644559.1	E-Value: 0.000e+0, PID: 76.88 Description: PREDICTED: Cannabis sativa myrcene synthase, chloroplastic (LOC115715884), transcript variant X1, mRNA [more]
XM_030644769.1	E-Value: 5.846e-89, PID: 87.03 Description: PREDICTED: Cannabis sativa (-)-limonene synthase, chloroplastic-like (LOC115716064), transcript variant X2, mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 31..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 12..34
None	No IPR available	PANTHER	PTHR31225:SF74	TRICYCLENE SYNTHASE, CHLOROPLASTIC	coord: 3..130
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 3..130
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 35..393
None	No IPR available	PANTHER	PTHR31225:SF9		coord: 35..393
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..44
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.693
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..49
None	No IPR available	TMHMM	TMhelix		coord: 10..29
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..35
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 36..54
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 55..55
None	No IPR available	PANTHER	PTHR31225:SF74	TRICYCLENE SYNTHASE, CHLOROPLASTIC	coord: 1..54
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..54
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..49
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 3..74 e-value: 3.0E-19 score: 69.4
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 258..387 e-value: 2.7E-51 score: 174.5
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 1..51 e-value: 1.1E-15 score: 57.8
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 1..130 e-value: 1.8E-41 score: 144.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 3..130
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 45..390 e-value: 1.3E-128 score: 431.5
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 254..390
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 1..57 e-value: 6.9E-20 score: 73.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 1..52
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 82..252 e-value: 1.3E-128 score: 431.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 46..205 e-value: 3.4E-45 score: 154.1
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 43..253

TPS41

Reanalysis of 21 trichome RNA-Seq samples, FN-clones109 (TMM50 minvalue)

Reanalysis of 21 trichome RNA-Seq samples, PK-clones109 (TMM50 minvalue)

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	AATTATAATTTTGTTAGTAGTACTACAAGATCAAGATTATCAAGATCAAG TGCTTGCTACCCCATTCAATGTACTGTAGTCGATAGTTCTAATCCAATGA TCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTAT ATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGT GAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATT CTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCT TATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAA TGTTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGAC TTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTT AAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTAT GGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAA GTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTAC ACTATAATGATATCGCAAGAAAAGAAATTAATGATTGATAATGATTATGA TTATAATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGA GGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAA CAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACAT GATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGA GGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATG GAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTA TTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATG ATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAA GCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACAT GAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTG AGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAA ACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTA TAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCT CAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAAT AATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGA GGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAG ATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACA TCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCG TGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATG AAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGC AAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACA TGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTA ATCCTTTCCCC
Sequence Length	1761
Sequence Checksum	6f984e0b29aaae35ec95242153c28b02

Sequence

AATTATAATTTTGTTAGTAGTACTACAAGATCAAGATTATCAAGATCAAG
TGCTTGCTACCCCATTCAATGTACTGTAGTCGATAGTTCTAATCCAATGA
TCGATCGACGATCGGGCAACTATGAACCATCCATTTGGTCTTTTGATTAT
ATTCAGTCTCTTACAAGCCAATATGAGGGAGAACCTTATAGAAGTCGGGT
GAAAGAGATCGAGGGAGATGTGAAAAGGATGCTAGTTGAGATGGAAAATT
CTTTAGCTCAACTTGAGCTCATTGACACATTGCAAAGACTTGGAGTATCT
TATCGCTTTGAGAATGAAATAAGTACTATTTTGAAGGAAAAATATGTCAA
TGTTAATAACCCTAATTATAATTTATACGCCATTGCTCTTGAATTTAGAC
TTCTACGTCAACATGGTTATGCAGTACCTCAAGAGATTTTTAATCATTTT
AAGGACGAGACAGGAAAATTCAAGGCAAACATAATTAGTGATGATATTAT
GGGAGTATTGGCCTTATATGAAGCTTCATTCTATGAGAAAAAAGGCGAAA
GTATTTTAGAGGAAGCTAGAATTTTCATAAAAAAATATCTCGAAGACTAC
ACTATAATGATATCGCAAGAAAAGAAATTAATGATTGATAATGATTATGA
TTATAATTTCGAAGTAGTGAATCATGCATTAGAGCTCCCACTTCATTGGA
GGACTACAAGAATAGAAGCTAAGTGGTTCATCGACGCGTATGAGAAAAAA
CAAGACATGAATCCTATTTTGCTTGAATTTGCTAAACTCGATTTCAACAT
GATACAATCAACACATCATGATGATCTAAAACATATATTCAGGTGGTGGA
GGCATACTAAACTTGGGGAGAAATTGAATTTTGCAAGAGATCGATTGATG
GAATGTTTCTTATGGAAGGTTGGAGTAAGATTTGAGCCAAAATTCAGTTA
TTTTAGAAAAACAACTGCCAAATTATATGAGCTAATAACATTAATTGATG
ATATATATGATGTTTATGGAACATTGGATGAATTAGAGCTTTTCACCAAA
GCTGTTGAGAGATGGGATGTGACAATGATAAATGAGTTACCAGAATACAT
GAAGATGCCTTTTCTTGTTTTACACAATACAATAAATGAAATAGTATTTG
AGATATTAAGAGACAAAGACATCTCCATCAACATTCAATAACTTAAGAAA
ACGTGGATAGATATGTGTAGAGGTTTTCTACAAGAAGCAAAATGGTACTA
TAGTGGATACACACCAACATTGGAAGAATATATAGAAAATGGTTGGATCT
CAGTGGGAGCACCAGTTCTTATTGTGCATGCTTATTTTTCTCATTCAAAT
AATAATAAACTTGTCTAAGTTTCAGATGAAGAAGTGGAATGTCTTAAAGA
GGGTTATCCCAATATTGTTCGACATGGATCCCTAATATTACGACTTGCAG
ATGATCTAGGAACATGTTCGGATGAAATGAAAAGAGGCGATGTTCCTACA
TCAATTCAATGTTACATGCATGATACTGGTGTTTCTGAAGACGAAGCTCG
TGAGCACATCAAGCATTTGATAAGCGAATCATGGAAGGAGATGAATAATG
AAAATGGAGATCATAATTCTTCTTTCTCGAAAGAATTTGTTCATGTTTGC
AAAAATCTTGGTAGAGCGTCACAATTTATATACCAATATGGAGATGGACA
TGCTTCTCAAAATACTCTATCAAAAGATCGTATTTTTAAAATTATTATTA
ATCCTTTCCCC

Sequence Length

1761

Sequence Checksum

6f984e0b29aaae35ec95242153c28b02

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS41
Identifier	TPS41
Time Accessioned	Thursday, November 21, 2024 - 09:54
Time Last Modified	Thursday, November 21, 2024 - 09:54