TPS24 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS24 vs. Genbank
Match Name: AGQN03000118.1
Description: Cannabis sativa cultivar Purple Kush 000117F, whole genome shotgun sequence

HSP 1 Score: 551.422 bits (298), Expect = 2.105e-154
Identity = 309/314 (98.41%), Postives = 309/314 (98.41%), Query Frame = 1

Query:     2048 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTGAAAATAAATTG 2361
                ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct:   340179 AGAGAGAATCCAAAGAAGGGAAATTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGA-TTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTG 339867

HSP 2 Score: 510.796 bits (276), Expect = 3.573e-142
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 1

Query:      108 GAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACTCTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGATCCCTTCAAATTCTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCCTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGG 392
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   352771 GAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACTCTCTGTCTCGTCATATGACACTGCCTGGGTGGCAATGATCCCTTCAAATTCTGGGCAGCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCTTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGG 352487

HSP 3 Score: 449.856 bits (243), Expect = 7.899e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:     1804 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 2049
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   340549 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGGCCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 340304

HSP 4 Score: 425.85 bits (230), Expect = 1.331e-116
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query:     1007 CAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 1236
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   343033 CAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 342804

HSP 5 Score: 398.15 bits (215), Expect = 2.902e-108
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 1

Query:      571 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAG-TTCC 794
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct:   343794 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGGTTCC 343570

HSP 6 Score: 388.917 bits (210), Expect = 1.747e-105
Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 1

Query:     1444 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGT 1663
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct:   341378 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAAC-TCATTCAATTGTTGGAAAAGT 341160

HSP 7 Score: 320.591 bits (173), Expect = 6.462e-85
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 1

Query:      391 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAG 572
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct:   344814 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAG 344633

HSP 8 Score: 257.805 bits (139), Expect = 5.139e-66
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

Query:     1662 GTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 1803
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   341058 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 340917

HSP 9 Score: 230.105 bits (124), Expect = 1.120e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query:      788 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 911
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   343494 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 343371

HSP 10 Score: 211.638 bits (114), Expect = 4.058e-52
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query:     1233 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 1346
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   342699 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 342586

HSP 11 Score: 193.172 bits (104), Expect = 1.470e-46
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1

Query:     1346 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTT 1452
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:   342494 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGTGTT 342388

HSP 12 Score: 183.939 bits (99), Expect = 8.846e-44
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1

Query:      908 ACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAG 1009
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   343211 ACAGATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAG 343110

HSP 13 Score: 98.9927 bits (53), Expect = 3.296e-18
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 1

Query:       49 TCATCAGCTTCTCCCATACCAAGACTAAATGGTGCAAGGAAAAGCAACATAGCTGTTTTG 108
                ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct:   352913 TCAACAGCTTCTCCCATACCAAGACTAAATG-TGCAAGGAAAAGCAACATAGCTGTTTTG 352855

HSP 14 Score: 95.2994 bits (51), Expect = 4.264e-17
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1

Query:        1 ATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTCCTCTTCTTCCTCATCAG 55
                |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct:   353112 ATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTC-TCTTCTTCCTCATCAG 353059


Match Name	Summary
AGQN03000118.1	E-Value: 2.105e-154, PID: 98.41 Description: Cannabis sativa cultivar Purple Kush 000117F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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Match Name	Summary
There are no matches against Genbank for this mRNA.

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS24 vs. Genbank
Match Name: NC_044373.1
Description: Cannabis sativa chromosome 4, cs10, whole genome shotgun sequence

HSP 1 Score: 564.348 bits (305), Expect = 2.656e-158
Identity = 311/314 (99.04%), Postives = 311/314 (99.04%), Query Frame = 1

Query:     2048 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTGAAAATAAATTG 2361
                |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 22538893 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTG 22538580

HSP 2 Score: 449.856 bits (243), Expect = 7.761e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:     1804 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 2049
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22539263 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 22539018

HSP 3 Score: 398.15 bits (215), Expect = 2.851e-108
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 1

Query:     1007 CAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 1236
                ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551101 CAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 22550872

HSP 4 Score: 398.15 bits (215), Expect = 2.851e-108
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 1

Query:      571 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAG-TTCC 794
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22551861 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGGTTCC 22551637

HSP 5 Score: 396.303 bits (214), Expect = 1.025e-107
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 1

Query:     1444 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGT 1663
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 22540095 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGT 22539876

HSP 6 Score: 331.671 bits (179), Expect = 2.933e-88
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1

Query:      391 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAG 572
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22552889 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAG 22552708

HSP 7 Score: 257.805 bits (139), Expect = 5.049e-66
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

Query:     1662 GTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 1803
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22539773 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 22539632

HSP 8 Score: 230.105 bits (124), Expect = 1.101e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query:      788 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 911
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551561 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 22551438

HSP 9 Score: 211.638 bits (114), Expect = 3.987e-52
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query:     1233 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 1346
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22550767 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 22550654

HSP 10 Score: 182.092 bits (98), Expect = 3.126e-43
Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 1

Query:     1346 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTT 1452
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 22541217 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGTGTT 22541111

HSP 11 Score: 178.399 bits (96), Expect = 4.044e-42
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 1

Query:      908 ACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAG 1009
                ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 22551279 ACAGATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAG 22551178


Match Name	Summary
NC_044373.1	E-Value: 2.656e-158, PID: 99.04 Description: Cannabis sativa chromosome 4, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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[Close]

BLAST of TPS24 vs. Genbank
Match Name: XM_030641434.1
Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X2, mRNA

HSP 1 Score: 3541.15 bits (1917), Expect = 0.000e+0
Identity = 1953/1971 (99.09%), Postives = 1953/1971 (99.09%), Query Frame = 1

Query:      391 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTGAAAATAAATTG 2361
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct:      338 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTG 2308

[Close]

BLAST of TPS24 vs. Genbank
Match Name: XM_030641433.1
Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X1, mRNA

HSP 1 Score: 3539.3 bits (1916), Expect = 0.000e+0
Identity = 1952/1970 (99.09%), Postives = 1952/1970 (99.09%), Query Frame = 1

Query:      391 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTGAAAATAAATT 2360
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct:      339 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATT 2308


Match Name	Summary
XM_030641434.1	E-Value: 0.000e+0, PID: 99.09 Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X2, mRNA [more]
XM_030641433.1	E-Value: 0.000e+0, PID: 99.09 Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X1, mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..52
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 24..51
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..23
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..52
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	GENE3D	1.50.10.160		coord: 55..257 e-value: 9.7E-143 score: 477.9
None	No IPR available	PANTHER	PTHR31739	FAMILY NOT NAMED	coord: 39..783
None	No IPR available	PANTHER	PTHR31739:SF3	ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC	coord: 39..783
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 459..726 e-value: 5.8E-70 score: 235.7
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 218..415 e-value: 1.0E-40 score: 139.5
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 48..466 e-value: 9.7E-143 score: 477.9
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 469..786 e-value: 2.8E-85 score: 288.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 457..782
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 226..439
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 58..240

TPS24

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTCCTCTTCTTCCTC ATCAGCTTCTCCCATACCAAGACTAAATGGTGCAAGGAAAAGCAACATAG CTGTTTTGAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAAT AATGTTGAACTCTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGAT CCCTTCAAATTCTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGT TACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCAT CCCTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGC AATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGGCTTGTCTT TCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCT ATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATC AGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATA ACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCAT GAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTG TGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTC CATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTT AAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGT ATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAA GGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGAT GAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGC TTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATG TATCTTCAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTAC CTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGC ATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATT TCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGG GGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAA GATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAG AGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCC TCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAA CATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGG TTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCA TACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGA TGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATG ATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAA TTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCA AGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAG AAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAG ATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAA ATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATAT CATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCT ATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAA ACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGA GAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCG CGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAAT GAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTA AGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAA ATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTC AAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTG AAAATAAATTG
Sequence Length	2361
Sequence Checksum	6fc38b17cdc98e6188790ea40c73280f

Sequence

ATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTCCTCTTCTTCCTC
ATCAGCTTCTCCCATACCAAGACTAAATGGTGCAAGGAAAAGCAACATAG
CTGTTTTGAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAAT
AATGTTGAACTCTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGAT
CCCTTCAAATTCTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGT
TACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCAT
CCCTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGC
AATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGGCTTGTCTT
TCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCT
ATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCGAAAAAATC
AGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATA
ACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCAT
GAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTG
TGAAAGAGTCTTCAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTC
CATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTT
AAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGT
ATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAA
GGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGAT
GAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGC
TTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATG
TATCTTCAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTAC
CTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGC
ATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATT
TCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGG
GGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAA
GATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAG
AGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCC
TCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAA
CATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGG
TTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCA
TACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGA
TGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATG
ATTTTTTTGATATTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAA
TTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTGTCGGAGCA
AGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAG
AAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAG
ATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAA
ATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATAT
CATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCT
ATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAA
ACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGA
GAGAATCCAAAGAAGGGAAACTGAATATAGTGTCACTAAGCCTACTGGCG
CGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAAT
GAAAAGTGCTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTA
AGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAA
ATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTC
AAATGAGATGATCAATGTCGCAAAAGCAATAATTGAGGAGCCCATAATTG
AAAATAAATTG

Sequence Length

2361

Sequence Checksum

6fc38b17cdc98e6188790ea40c73280f

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS24
Identifier	TPS24
Time Accessioned	Thursday, November 21, 2024 - 10:03
Time Last Modified	Thursday, November 21, 2024 - 10:03