TPS48 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS48 vs. Genbank
Match Name: AGQN03005138.1
Description: Cannabis sativa cultivar Purple Kush 005142F, whole genome shotgun sequence

HSP 1 Score: 542.189 bits (293), Expect = 7.017e-152
Identity = 297/299 (99.33%), Postives = 297/299 (99.33%), Query Frame = 1

Query:     1022 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    27350 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACCTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 27052

HSP 2 Score: 433.236 bits (234), Expect = 4.406e-119
Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    27792 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAATGGAGTAAAAGTGGGATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 27547

HSP 3 Score: 412.923 bits (223), Expect = 5.740e-113
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    28710 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTAATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 28485

HSP 4 Score: 377.837 bits (204), Expect = 2.094e-102
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    31959 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 31756

HSP 5 Score: 261.498 bits (141), Expect = 2.200e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:      637 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    28031 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 27891

HSP 6 Score: 204.252 bits (110), Expect = 3.761e-50
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 319
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct:    29357 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCCAACAAACTAATAAAGCTCTATGGATGGGAAAGACATCTTCACAAAGGT 29242

HSP 7 Score: 185.785 bits (100), Expect = 1.362e-44
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query:      316 AGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGT 418
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct:    28954 AGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGAGTGAACTTGAACAGTTAACAAGGT 28852

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BLAST of TPS48 vs. Genbank
Match Name: AGQN03002754.1
Description: Cannabis sativa cultivar Purple Kush 002758F, whole genome shotgun sequence

HSP 1 Score: 531.109 bits (287), Expect = 1.519e-148
Identity = 295/299 (98.66%), Postives = 295/299 (98.66%), Query Frame = 1

Query:     1022 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    33364 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTTCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 33662

HSP 2 Score: 433.236 bits (234), Expect = 4.406e-119
Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    32925 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAATGGAGTAAAAGTGGGATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 33170

HSP 3 Score: 418.463 bits (226), Expect = 1.234e-114
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    32015 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 32240

HSP 4 Score: 346.444 bits (187), Expect = 5.905e-93
Identity = 200/205 (97.56%), Postives = 200/205 (97.56%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCT-ATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||||||
Sbjct:    28843 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGC-TTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTAATTTCAGAAGGAGCTCAACAT---AATCCCTTTAAGAAACTG 29043

HSP 5 Score: 261.498 bits (141), Expect = 2.200e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:      637 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    32688 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 32828

HSP 6 Score: 261.498 bits (141), Expect = 2.200e-67
Identity = 199/227 (87.67%), Postives = 199/227 (87.67%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAA-TTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||| | |||||||||| |||||||||||||||||||| |||||||||||||  |||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||  || | ||||||||||||||||||||||  |||||| ||||||| ||||||  | || ||||||||  |||||||||
Sbjct:    42506 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAG-AAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATCACTGAGTTAAAAACTTTT-ACTAAGGCCTTTCAAAGGT 42730

HSP 7 Score: 244.878 bits (132), Expect = 2.216e-62
Identity = 180/204 (88.24%), Postives = 180/204 (88.24%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                |||||| | ||||||||| |||||||||| |  |||||||  || | ||||| ||| || ||| ||| | | ||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct:    53397 TGGTTCATGAAGAATGAGAAAATAAAAAATTGTATAGAATCAAATTATGAATCCTTCTTGGTTACAACGTTGAATCTTTACAGAGCTACTGATTTTGCTTTTCACGGTGAACATGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGTAGGAGCTCGACATACAAATCCCTTTAACAAACTG 53600

HSP 8 Score: 230.105 bits (124), Expect = 6.205e-58
Identity = 192/226 (84.96%), Postives = 192/226 (84.96%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||| || ||| ||  ||| |||||||||||||||||||
Sbjct:    68535 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 68310

HSP 9 Score: 222.718 bits (120), Expect = 1.038e-55
Identity = 170/195 (87.18%), Postives = 170/195 (87.18%), Query Frame = 1

Query:       10 AAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                ||||||||||| ||||||||  |||||||||  || | ||||| |||||  ||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | || ||||||| || |||||||| |||||||||||| ||||| ||||||
Sbjct:    40775 AAGAATGAGGATATAAAAAATCACATAGAATCAAATTATGAATGCTTTTCGGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTTTAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTG 40969

HSP 10 Score: 215.332 bits (116), Expect = 1.737e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 319
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    31314 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 31429

HSP 11 Score: 207.945 bits (112), Expect = 2.907e-51
Identity = 188/226 (83.19%), Postives = 188/226 (83.19%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||   |||||| ||||||||||  | ||| || | ||||   ||| |||||||||||||| |||||||| ||||| |||| ||  || | ||  |  | ||||||||||||||||||||||||||| || ||||||| |||||   ||| ||||||||| |||||||||
Sbjct:    54413 AGGTGGTGTAAAGAATGGGGACTTAGTGAAATGGGATTCGGTAGAGAGAAAAGTACATATTGTTATTTCGCAGTAGCTTCAGTTTGTTGCTCTTTGGACTATAATTCTCCAATTCGAATGATGATTGCAAAGAGTGCAATTTTAATTACAATAACAGATGATTTTTTTGATATGAAAGGCTCTATAATCACTGAGTTAAACACCTTTACTAAGGCAGTTCAAAGGT 54638

HSP 12 Score: 200.558 bits (108), Expect = 4.865e-49
Identity = 205/252 (81.35%), Postives = 205/252 (81.35%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGA-AAC--CGACCTTAAAAAA--A-TCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| | ||||||  |||||||||  |||||||||| |||||||||||||||||||| | | || | | ||   | || |||       | ||||| |||| |  |||  | | | | |||||||| ||| | ||||||| |||||||||| |||| |||||||||||||||| ||||
Sbjct:    43060 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATTCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAG 43311

HSP 13 Score: 185.785 bits (100), Expect = 1.362e-44
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query:      316 AGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGT 418
                |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    31772 AGGTTATCAAAGTTTTACAATGATAAATTACTTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGT 31874

HSP 14 Score: 156.239 bits (84), Expect = 1.068e-35
Identity = 110/123 (89.43%), Postives = 110/123 (89.43%), Query Frame = 1

Query:      655 TTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| || | ||||||||||  |   |||||||||||
Sbjct:    42831 TTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATT 42953

HSP 15 Score: 113.766 bits (61), Expect = 6.520e-23
Identity = 77/85 (90.59%), Postives = 77/85 (90.59%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCT 288
                ||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||||||| |||||
Sbjct:    42025 GATTGAGAATGAGTTGAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCT 42109

[Close]

BLAST of TPS48 vs. Genbank
Match Name: AGQN03001208.1
Description: Cannabis sativa cultivar Purple Kush 001208F, whole genome shotgun sequence

HSP 1 Score: 268.884 bits (145), Expect = 1.315e-69
Identity = 200/227 (88.11%), Postives = 200/227 (88.11%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAA-TTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||  || | ||||||||||||||||||||||  |||||| ||||||| ||||||  | || ||||||||  |||||||||
Sbjct:   140725 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATCACTGAGTTAAAAACTTTT-ACTAAGGCCTTTCAAAGGT 140950

HSP 2 Score: 246.725 bits (133), Expect = 6.161e-63
Identity = 195/226 (86.28%), Postives = 195/226 (86.28%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||| ||||||||||||||||||||||||||||  | || ||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||  || ||||||| ||| ||  ||| |||||||||||||||||||
Sbjct:   153976 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAGGGTGCTATAATAATAACGGTTGCAGATGATTTTTTTGATATGAAAGATTCCTTAATCACTGAGTTAGAAACCTTTACTAAGGCAATTCAAAGGT 153751

HSP 3 Score: 222.718 bits (120), Expect = 1.038e-55
Identity = 170/195 (87.18%), Postives = 170/195 (87.18%), Query Frame = 1

Query:       10 AAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                |||||||| || ||||||||  |||||||||  |||| ||||| |||||  ||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | || ||||||| || |||||||| |||||||||||| ||||| ||||||
Sbjct:   138999 AAGAATGAAGATATAAAAAATCACATAGAATCAAACTATGAATGCTTTTCAGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTTTAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTG 139193

HSP 4 Score: 211.638 bits (114), Expect = 2.247e-52
Identity = 207/252 (82.14%), Postives = 207/252 (82.14%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGA-AAC--CGACCTTAAAAAA--A-TCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| ||||||||  |||||||||  |||||||||| |||||||||||||||||||| | | || | | ||   | || |||       | ||||| |||| |  |||  | | | | |||||||| ||| | ||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct:   141279 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTTAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATTCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTTTGTTAAATGACTTACAAAGTTATGAG 141530

HSP 5 Score: 161.779 bits (87), Expect = 2.296e-37
Identity = 123/141 (87.23%), Postives = 123/141 (87.23%), Query Frame = 1

Query:      637 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                |||||| ||  | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| || | ||||||||||  |   |||||||||||
Sbjct:   141032 AGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATT 141172

HSP 6 Score: 119.306 bits (64), Expect = 1.401e-24
Identity = 109/129 (84.50%), Postives = 109/129 (84.50%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAG---------CTTTATGGATGGGAAAGACATCTTCACAAAGGTTATC 323
                ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||||||| |||         ||||||||||||||||||| ||||  ||||||| |||
Sbjct:   140242 GATTGAGAATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCTCAATCATCTTTATGGATGGGAAAGACTTCTTTCCAAAGGTAATC 140370


Match Name	Summary
AGQN03005138.1	E-Value: 7.017e-152, PID: 99.33 Description: Cannabis sativa cultivar Purple Kush 005142F, whole genome shotgun sequence [more]
AGQN03002754.1	E-Value: 1.519e-148, PID: 98.66 Description: Cannabis sativa cultivar Purple Kush 002758F, whole genome shotgun sequence [more]
AGQN03001208.1	E-Value: 1.315e-69, PID: 88.11 Description: Cannabis sativa cultivar Purple Kush 001208F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
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Match Name	Summary
There are no matches against Genbank for this mRNA.

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS48 vs. Genbank
Match Name: NC_044378.1
Description: Cannabis sativa chromosome 7, cs10, whole genome shotgun sequence

HSP 1 Score: 531.109 bits (287), Expect = 1.492e-148
Identity = 295/299 (98.66%), Postives = 295/299 (98.66%), Query Frame = 1

Query:     1022 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   524712 AGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCGAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 525010

HSP 2 Score: 444.316 bits (240), Expect = 2.000e-122
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   524276 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 524521

HSP 3 Score: 412.923 bits (223), Expect = 5.640e-113
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   523361 AGGTGGTCTAAAAAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 523586

HSP 4 Score: 377.837 bits (204), Expect = 2.057e-102
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   519954 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 520157

HSP 5 Score: 263.345 bits (142), Expect = 6.010e-68
Identity = 199/227 (87.67%), Postives = 199/227 (87.67%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAA-TTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||  || | ||||||||||||||||||||||  |||||| | ||||| ||||||  | || ||||||||  |||||||||
Sbjct:   544459 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATTACTGAGTTAAAAACTTTT-ACTAAGGCCTTTCAAAGGT 544684

HSP 6 Score: 261.498 bits (141), Expect = 2.162e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:      637 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   524034 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 524174

HSP 7 Score: 244.878 bits (132), Expect = 2.177e-62
Identity = 180/204 (88.24%), Postives = 180/204 (88.24%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                |||||| | ||||||||| |||||||||| |  |||||||  || | ||||| ||| || ||| ||| | | ||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||
Sbjct:   553554 TGGTTCATGAAGAATGAGAAAATAAAAAATTGTATAGAATCAAATTATGAATCCTTCTTGGTTACAACGTTGAATCTTTACAGAGCTACTGATTTTGCTTTTCACGGTGAACATGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGTAGGAGCTCGACATACAAATCCCTTTAACAAACTG 553757

HSP 8 Score: 241.185 bits (130), Expect = 2.816e-61
Identity = 194/226 (85.84%), Postives = 194/226 (85.84%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||  || ||| ||  ||| |||||||||||| ||||||
Sbjct:   569201 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAGAAAAGTACATACTGTTATTTTGCAGTAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCAACGAGTTAGAAAACTTTACTAAGGCAATTGAAAGGT 568976

HSP 9 Score: 222.718 bits (120), Expect = 1.020e-55
Identity = 170/195 (87.18%), Postives = 170/195 (87.18%), Query Frame = 1

Query:       10 AAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTG 204
                |||||||| || ||||||||  |||||||||  |||| ||||| |||||  ||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | || ||||||| || |||||||| |||||||||||| ||||| ||||||
Sbjct:   542362 AAGAATGAAGATATAAAAAATCACATAGAATCAAACTATGAATGCTTTTCAGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTTTAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTG 542556

HSP 10 Score: 215.332 bits (116), Expect = 1.707e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 319
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   522682 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 522797

HSP 11 Score: 207.945 bits (112), Expect = 2.856e-51
Identity = 188/226 (83.19%), Postives = 188/226 (83.19%), Query Frame = 1

Query:      415 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 640
                ||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||   |||||| ||||||||||  | ||| || | ||||   ||| |||||||||||||| |||||||| ||||| |||| ||  || | ||  |  | ||||||||||||||||||||||||||| || ||||||| |||||   ||| ||||||||| |||||||||
Sbjct:   554614 AGGTGGTGTAAAGAATGGGGACTTAGTGAAATGGGATTCGGTAGAGAGAAAAGTACATATTGTTATTTCGCAGTAGCTTCAGTTTGTTGCTCTTTGGACTATAATTCTCCAATTCGAATGATGATTGCAAAGAGTGCAATTTTAATTACAATAACAGATGATTTTTTTGATATGAAAGGCTCTATAATCACTGAGTTAAACACCTTTACTAAGGCAGTTCAAAGGT 554839

HSP 12 Score: 206.098 bits (111), Expect = 1.027e-50
Identity = 206/252 (81.75%), Postives = 206/252 (81.75%), Query Frame = 1

Query:      778 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGA-AA--CCGACCTTAAAAAA--A-TCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAG 1023
                ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| | ||||||  |||||||||  |||||||||| |||||||||||||||||||| | | || | | ||  || || |||       | ||||| |||| |  |||  | | | | |||||||| ||| | ||||||| |||||||||| |||| |||||||||||||||| ||||
Sbjct:   545016 TGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAG 545267

HSP 13 Score: 185.785 bits (100), Expect = 1.338e-44
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query:      316 AGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGT 418
                |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   523118 AGGTTATCAAAGTTTTACAATGATAAATTACTTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGT 523220

HSP 14 Score: 161.779 bits (87), Expect = 2.255e-37
Identity = 123/141 (87.23%), Postives = 123/141 (87.23%), Query Frame = 1

Query:      637 AGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATT 777
                |||||| ||  | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| || | ||||||||||  |   |||||||||||
Sbjct:   544767 AGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATT 544907

HSP 15 Score: 113.766 bits (61), Expect = 6.405e-23
Identity = 108/129 (83.72%), Postives = 108/129 (83.72%), Query Frame = 1

Query:      204 GATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAG---------CTTTATGGATGGGAAAGACATCTTCACAAAGGTTATC 323
                ||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||||||| |||         ||||||||||||||||||| ||||  ||||||| |||
Sbjct:   543522 GATTGAGAATGAGTTGAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCTCAATCATCTTTATGGATGGGAAAGACTTCTTTCCAAAGGTAATC 543650


Match Name	Summary
NC_044378.1	E-Value: 1.492e-148, PID: 98.66 Description: Cannabis sativa chromosome 7, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS48 vs. Genbank
Match Name: XM_030623148.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X1, mRNA

HSP 1 Score: 2394.38 bits (1296), Expect = 0.000e+0
Identity = 1312/1320 (99.39%), Postives = 1312/1320 (99.39%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1104 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTACTTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAAAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCGAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 2423

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BLAST of TPS48 vs. Genbank
Match Name: XM_030623146.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X1, mRNA

HSP 1 Score: 1352.87 bits (732), Expect = 0.000e+0
Identity = 1133/1327 (85.38%), Postives = 1133/1327 (85.38%), Query Frame = 1

Query:       10 AAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAAT-------AA--AGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGA-TTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGA-AA--CCGACCTTAAAAAA--A-TCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||| || ||||||||  |||||||||  |||| ||||| |||||  ||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | || ||||||| || |||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||  ||||||| ||||||||||||       ||  | ||||||||||||||||||| ||||  |||||||| || | |||| |||| || ||| || ||||||||||||| ||||| || ||||||||||| | |||||||||||| ||||||||||| ||||||||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||  || | ||||||||||||||||||||||  |||||| | ||||| || |||| | || ||||||||  ||||||||||| ||  | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| || | ||||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| | ||||||  |||||||||  |||||||||| |||||||||||||||||||| | | || | | ||  || || |||       | ||||| |||| |  |||  | | | | |||||||| ||| | ||||||| |||||||||| |||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||| || || ||||||||||| |||| |||| |||| |||  |||||||| |||||||||| | ||||||||||||||| | |||||||| ||||| || || |||||| |||||   |   |||| |||||||||||| | ||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||| || ||  ||||||||
Sbjct:     1139 AAGAATGAAGATATAAAAAATCACATAGAATCAAACTATGAATGCTTTTCAGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTTTAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTGATTGAGAATGAGTTGAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCTCAATCATCTTTATGGATGGGAAAGACTTCTTTCCAAAGGTTGTCGAGGTTTCACAACGACAAACTAGTTCGTCTAGCCACCTTAAATTATGAGTTCAAACAATCTATTTACAAGACCGAACTTGAACAATTAACAAGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATTACTGAGTTAAAAACTTTT-ACTAAGGCCTTTCAAAGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGA-AAT--GGAAGAAGCAGTAAAGTACGTAAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATT---G---ATGGCTTTACCAATCTTTCAAAAGAGTGTAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGACGACATTAGCAAAGCAATCTATGTTCCTTTG 2455

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BLAST of TPS48 vs. Genbank
Match Name: XM_030624715.1
Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase (LOC115697633), mRNA

HSP 1 Score: 1247.61 bits (675), Expect = 0.000e+0
Identity = 1122/1337 (83.92%), Postives = 1122/1337 (83.92%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAA-CAA---A-CTAA-T-A--AAGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGT-TTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTA-CGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCA---ACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATT-A--ATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||| | ||||||||| |||||||||| |  |||||||  || | ||||| ||| || ||| ||| | | ||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| || | |||||| | ||||||||  ||| ||| ||| |||   | | || | |  | ||| ||||||||||||||   || || |||||||| |   ||| || | ||||| ||| || || ||||||||| ||||||||| ||| || ||||||| | | | |||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||   |||||| ||||||||||  | ||| || | ||||   ||| |||||||||||||| |||||||| ||||| |||| ||  || | ||  |  | ||||||||||||||||||||||||||| || ||||||| |||||   ||| ||||||||| ||||||||||| ||  |||||||||| ||||||||||||| || |||||||||||||||||||||| ||||| ||||||| ||   |||||||||||||| ||||||||||||| |||||| ||||||||||  |   ||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||  |||||||||  |||||||||| ||||| ||| ||||||||||||||||||| ||  ||   |||||||  |    |   ||||  ||||||||| | |   |||||||||| ||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||| ||||| ||||| |||||||||||||| ||||||||||| ||||  ||| |||||| |  |||||||| |||||||||| ||||||||||||||||  |||||||||| ||||| ||| | |||||||||||| |  |||||||| |||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||| |||||||| | ||||| ||||||  |||||| |||||  ||||||||
Sbjct:      997 TGGTTCATGAAGAATGAGAAAATAAAAAATTGTATAGAATCAAATTATGAATCCTTCTTGGTTACAACGTTGAATCTTTACAGAGCTACTGATTTTGCTTTTCACGGTGAACATGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGTAGGAGCTCGACATACAAATCCCTTTAACAAACTGATTGAGCATGAATTAAGTCTTTCATGGATGGCTAGATTGGATCACTTAGAACATAGAGTTTATATAGAAGCAACTGATCAAACTCATGATGCTCTATGGATGGGAAAG---TCCTCTCAAAGGTTGT-TGAGTGTTCATAATGACAAACTAGTTTGTCTAGCCAATTTAAACTATCGA-TTGAAACAGTCTCTCTTCAAGACTGAACTCGAGCATTTAACAAGGTGGTGTAAAGAATGGGGACTTAGTGAAATGGGATTCGGTAGAGAGAAAAGTACATATTGTTATTTCGCAGTAGCTTCAGTTTGTTGCTCTTTGGACTATAATTCTCCAATTCGAATGATGATTGCAAAGAGTGCAATTTTAATTACAATAACAGATGATTTTTTTGATATGAAAGGCTCTATAATCACTGAGTTAAACACCTTTACTAAGGCAGTTCAAAGGTGGGATGGTGAAGGGTTGTGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCATGTAAAGGAAATGGCAATCACTATGTACCTTGATCAACAAGAAAAAAATCATGATGACATAACCAATTGGCTAAAAGAAATTTGGTATGAAACAATTTGTTCATGGCTCACTGAATCTGAGTGGAGTAAAAGTGGGATTGTACCAACCATGGATGAATATCTTAAAGTTGGAATGACTTCCATAGCAACTCACACCTTACTTATTCCAGCTTCATTTCTTCTAAAGTCGGGTTTAAAAA--T----G---CAATCGATGGAGTATGATAACATTACTAAATTAGTCATGATTATTTGTCGCTTATTGAATGACATACAAAGTTATGAGAAGGAAAAAGATGAAGGTAAACCGAACTCAATCACAGTCTACATGAAGAACAATTCCGAGGTAGAGA-T--GGAAGAAGCAGTAAAGTACGTGAAAGAGATATTAAATAATAAGAAGAAAGAGTTACTTAAACATGTTTTGATTGATGATGACAATAGTTTTACCAATCTTTCTAAAGAGTGTAGGCTTCTACACCTCTCTTGTTTAAAAGTATTTCAAATGTTTTTTAACTCTTCGAATCGATACGATTCAAACACTGAAATACTTGATGACATTGCCAAAGCAATTTATGTTCCTTTG 2316

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BLAST of TPS48 vs. Genbank
Match Name: XM_030623151.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X3, mRNA

HSP 1 Score: 1236.53 bits (669), Expect = 0.000e+0
Identity = 681/687 (99.13%), Postives = 681/687 (99.13%), Query Frame = 1

Query:      634 CAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1416 CAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCGAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 2102

HSP 2 Score: 590.202 bits (319), Expect = 1.811e-167
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 319
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1104 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGT 1422

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BLAST of TPS48 vs. Genbank
Match Name: XM_030623150.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X2, mRNA

HSP 1 Score: 1232.84 bits (667), Expect = 0.000e+0
Identity = 679/685 (99.12%), Postives = 679/685 (99.12%), Query Frame = 1

Query:      636 AAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1517 AAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCGAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 2201

HSP 2 Score: 771.173 bits (417), Expect = 0.000e+0
Identity = 428/433 (98.85%), Postives = 428/433 (98.85%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAGAATGGG 433
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||
Sbjct:     1104 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTACTTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGAATAATGAA-GGG 1535

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BLAST of TPS48 vs. Genbank
Match Name: XM_030624716.1
Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase-like (LOC115697634), mRNA

HSP 1 Score: 976.151 bits (528), Expect = 0.000e+0
Identity = 1091/1359 (80.28%), Postives = 1091/1359 (80.28%), Query Frame = 1

Query:        1 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTT-CA--GAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGC---TT-TATGGATGGGAAAGACATC-TTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATT-A-A-TGAC-A--ATG--G-T--T--T--TA----C-C-A--A-T---C-T-T-CCTAAAGAGTG-TAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                |||||| || | || || ||||| |||||  |||| ||    ||||  ||||||||||   ||    || |||||||||||| ||| || ||| |||||||||| | |||||||||||||||||||  |||||  |||||||||||| |||||||||||| |||||  |  |||| |  |  | || || ||   ||| | || |||||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||||  || ||| ||||||| ||| |   || ||||| | ||||||| ||| ||  | |||||| | ||   || | ||||| |||||||||||||||||||  ||||| ||| | |||||||| | ||| | |||| ||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||  || ||| ||  ||| |||||||||||| |||||||| ||  ||| || ||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||| ||| | |||||||||| |||||||||| ||||      ||||| || |  | | ||||| |||| ||||||||||| |||  ||||||||||||||||||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||| | |||| || || | |||||||| ||| || ||||||| || |||||||   |  |||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||  |||| | | || ||||||||||||||||| ||||| ||| ||||||| |||   ||| |||||| |   ||||||| | |  ||||| || |||||||| ||||  | |||||||| || || |||||||||||||||||| | | |||  |  |||  | |  |  |  ||    | | |  | |   | | | |||||||| || |||| || | ||| | ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||   |||||||||||| || |||  ||||||||| || |||||||||
Sbjct:      991 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATTTTGCTTTTCAAGATGAATTTGAGCTTGATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTTAATGGAAGAAAATGGAGAT-CACAT--ATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAA-AAACCATGTTCTATGGCTTGGAAAGA-ATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAGAAAAGTACATACTGTTATTTTGCAGTAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCAACGAGTTAGAAAACTTTACTAAGGCAATTGAAAGGTGGGATGGTGAGGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTGTGTACCTTGATCAACAAGAAACAAGT------GACATCACAAATTTCCTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGATATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGA-TC--GAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAATGATGATGATGATGATGATGATGATAATAACACTACCAATATTCATCTGCCTAAAGA-TGTTAGGGTTTTGCACCTTTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCAAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTG 2334

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BLAST of TPS48 vs. Genbank
Match Name: XM_030623147.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X2, mRNA

HSP 1 Score: 678.841 bits (367), Expect = 0.000e+0
Identity = 591/699 (84.55%), Postives = 591/699 (84.55%), Query Frame = 1

Query:      629 CAATTCA-AAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGA-AA--CCGACCTTAAAAAA--A-TCTCAGTTACAATTAATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAGTGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTG 1320
                ||||| | ||||||| ||  | ||| |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| || | ||||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| | ||||||  |||||||||  |||||||||| |||||||||||||||||||| | | || | | ||  || || |||       | ||||| |||| |  |||  | | | | |||||||| ||| | ||||||| |||||||||| |||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||| || || ||||||||||| |||| |||| |||| |||  |||||||| |||||||||| | ||||||||||||||| | |||||||| ||||| || || |||||| |||||   |   |||| |||||||||||| | ||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||| || ||  ||||||||
Sbjct:     1544 CAATTAACAAGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGA-AAT--GGAAGAAGCAGTAAAGTACGTAAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATT---G---ATGGCTTTACCAATCTTTCAAAAGAGTGTAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGACGACATTAGCAAAGCAATCTATGTTCCTTTG 2233

HSP 2 Score: 435.083 bits (235), Expect = 8.982e-121
Identity = 360/420 (85.71%), Postives = 360/420 (85.71%), Query Frame = 1

Query:       10 AAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAG---------CTTTATGGATGGGAAAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGG 420
                |||||||| || ||||||||  |||||||||  |||| ||||| |||||  ||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | || ||||||| || |||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||||||| |||         ||||||||||||||||||| ||||  |||||||| || | |||| |||| || ||| || ||||||||||||| ||||| || ||||||||||| | |||||||||||| ||||||||||| ||||||||||||
Sbjct:     1139 AAGAATGAAGATATAAAAAATCACATAGAATCAAACTATGAATGCTTTTCAGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTTTAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTGATTGAGAATGAGTTGAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCTCAATCATCTTTATGGATGGGAAAGACTTCTTTCCAAAGGTTGTCGAGGTTTCACAACGACAAACTAGTTCGTCTAGCCACCTTAAATTATGAGTTCAAACAATCTATTTACAAGACCGAACTTGAACAATTAACAAGGTGG 1558


Match Name	Summary
XM_030623148.1	E-Value: 0.000e+0, PID: 99.39 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X1, mRNA [more]
XM_030623146.1	E-Value: 0.000e+0, PID: 85.38 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X1, mRNA [more]
XM_030624715.1	E-Value: 0.000e+0, PID: 83.92 Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase (LOC115697633), mRNA [more]
XM_030623151.1	E-Value: 1.811e-167, PID: 99.13 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X3, mRNA [more]
XM_030623150.1	E-Value: 0.000e+0, PID: 99.12 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X2, mRNA [more]
XM_030624716.1	E-Value: 0.000e+0, PID: 80.28 Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase-like (LOC115697634), mRNA [more]
XM_030623147.1	E-Value: 8.982e-121, PID: 84.55 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X2, mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 13..33
None	No IPR available	COILS	Coil	Coil	coord: 362..382
None	No IPR available	PANTHER	PTHR31739	FAMILY NOT NAMED	coord: 1..440
None	No IPR available	PANTHER	PTHR31739:SF25	(E,E)-GERANYLLINALOOL SYNTHASE	coord: 1..440
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..36
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 117..382 e-value: 9.1E-62 score: 208.8
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 16..73 e-value: 2.2E-10 score: 40.5
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 127..440 e-value: 1.5E-75 score: 256.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 112..436
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 1..125 e-value: 3.4E-31 score: 110.2
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 16..92

TPS48

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGA ATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTT TTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTA CTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAA ACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACC TCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGA AAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCG TCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAAC TTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGA TTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTG CTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTG CTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTA TTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGA AGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTG TAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAA GACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATG GCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAG AATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTT CCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATT AATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGT TGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAAC TCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGA AGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCC TTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAG TGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAA CTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACA AAGCGATTTACATTCCTTTG
Sequence Length	1320
Sequence Checksum	0869940c18e70e9fff82ce0214206833

Sequence

TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGA
ATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTT
TTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTA
CTTGAGAAATCTATTTCAGAAGGAGCTCAACATACAAATCCCTTTAAGAA
ACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACC
TCGAACATAGGTTTTTTATCGAACAAACTAATAAAGCTTTATGGATGGGA
AAGACATCTTCACAAAGGTTATCAAAGTTTTACAATGATAAATTAATTCG
TCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAAC
TTGAACAGTTAACAAGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGA
TTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTG
CTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTG
CTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTA
TTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGA
AGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTG
TAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAA
GACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATG
GCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAG
AATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTT
CCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAGTTACAATT
AATGGAGTATAAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGT
TGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAAC
TCAATCACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGA
AGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCC
TTGAGCATGTTTTGATTAATGACAATGGTTTTACCAATCTTCCTAAAGAG
TGTAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAA
CTCTTCAAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACA
AAGCGATTTACATTCCTTTG

Sequence Length

1320

Sequence Checksum

0869940c18e70e9fff82ce0214206833

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS48
Identifier	TPS48
Time Accessioned	Saturday, April 20, 2024 - 03:44
Time Last Modified	Saturday, April 20, 2024 - 03:44