TPS61 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR036965	Terpene_synth_N_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS61 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 817.339 bits (442), Expect = 0.000e+0
Identity = 447/449 (99.55%), Postives = 447/449 (99.55%), Query Frame = 1

Query:     1527 GGCTGAACAGGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAAACTAGCTAGGATGATGAGTCCTTTAATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAAAAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTATTATTATTATTATTATTATTATTATT 1975
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10534390 GGCTGAACAGGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGAAATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAAACTAGCTAGGATGATGAGTCCTT-AATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAAAAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTATTATTATTATTATTATTATTATTATT 10533943

HSP 2 Score: 701.001 bits (379), Expect = 0.000e+0
Identity = 414/430 (96.28%), Postives = 414/430 (96.28%), Query Frame = 1

Query:      498 ATAT-CATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||| ||||||| || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 10536466 ATATGCATGTTT-AC-AGACATATTTGTTGGCTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATCACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAATTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 10536039

HSP 3 Score: 477.556 bits (258), Expect = 3.299e-132
Identity = 280/290 (96.55%), Postives = 280/290 (96.55%), Query Frame = 1

Query:      229 AGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCCCC---TCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 515
                ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 10537605 AGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATAATATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCAATTACTACTACAATAATAAAGACATTAAAGATCCCCGCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTCCTTAGGCTTCATGGATATCAAGTTTCACAAGG 10537316

HSP 4 Score: 425.85 bits (230), Expect = 1.212e-116
Identity = 240/245 (97.96%), Postives = 240/245 (97.96%), Query Frame = 1

Query:     1284 GTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCCATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGG 1528
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10534708 GTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTACATCCCATCCCTTGAGGAGTATTTGAGCAATGCATGGATTTCATCTTCGGGGCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGG 10534464

HSP 5 Score: 412.923 bits (223), Expect = 9.435e-113
Identity = 232/236 (98.31%), Postives = 232/236 (98.31%), Query Frame = 1

Query:        1 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGA 236
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct: 10538038 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAGTAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTCGAGTCTCTTAACAACAAATATGAT-GT-AAGA 10537805

HSP 6 Score: 390.763 bits (211), Expect = 4.421e-106
Identity = 219/223 (98.21%), Postives = 219/223 (98.21%), Query Frame = 1

Query:      922 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGT 1144
                |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 10535275 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGAATTTGCGAGAGATAGGTTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTGAGACACTTCACCAATGCCGTTAATAGGT 10535053

HSP 7 Score: 375.99 bits (203), Expect = 1.238e-101
Identity = 212/216 (98.15%), Postives = 212/216 (98.15%), Query Frame = 1

Query:     1937 TTATGATTAATTATTATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTTTAAGTTTTTTATGTACAACTCTTCAAAGCACGTGAACGATGTCTCCTGTACTTTGAGGAATTGAGAATGTGTGTTTGTCGTTGGTGGTTGATCACTATAGCTAGTTGTTATGTATCGTGGTGATTTTAGTGTAATTTATATTCAGATAAA 2152
                |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 10533941 TTATTATT-ATTATTATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTTTAAGTTTTTTATGTACAACTCTTCAAAGCACGTGAACGATGTCTCCTGTACTTTGAGGAATTGCGAATGTGTGTTTGTCGTTGGTGGTTGATCACTATAGCTAGTTGTTATGTATCATGGTGATTTTAGTGTAATTTATATTCAGATAAA 10533727

HSP 8 Score: 235.645 bits (127), Expect = 2.192e-59
Identity = 141/148 (95.27%), Postives = 141/148 (95.27%), Query Frame = 1

Query:     1137 TGATAGGTGGGATGTACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCG 1284
                ||| ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 10534989 TGACAGGTGGGATGTCCGGGAAACTGAGGAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAATGGTTGCAAATTAGTTTTACCTAATCTAAAGGGAGCG 10534842

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BLAST of TPS61 vs. Genbank
Match Name: CM010797.2
Description: Cannabis sativa cultivar Purple Kush chromosome 6, whole genome shotgun sequence

HSP 1 Score: 701.001 bits (379), Expect = 0.000e+0
Identity = 414/430 (96.28%), Postives = 414/430 (96.28%), Query Frame = 1

Query:      498 ATAT-CATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||| ||||||| || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618373 ATATGCATGTTT-AC-AGACATATTTGTTGGCTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATCACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAATTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 16617946

HSP 2 Score: 693.614 bits (375), Expect = 0.000e+0
Identity = 413/430 (96.05%), Postives = 413/430 (96.05%), Query Frame = 1

Query:      498 ATAT-CATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||| ||||||| || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 16616602 ATATGCATGTTT-AC-AGACATATTTGTTGGCTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATCACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTT-GTTGATTTAGCCAAATTAAACTTTAACATAATTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 16617028

HSP 3 Score: 477.556 bits (258), Expect = 3.299e-132
Identity = 280/290 (96.55%), Postives = 280/290 (96.55%), Query Frame = 1

Query:      229 AGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCCCC---TCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 515
                ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 16619512 AGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATAATATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCAATTACTACTACAATAATAAAGACATTAAAGATCCCCGCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTCCTTAGGCTTCATGGATATCAAGTTTCACAAGG 16619223

HSP 4 Score: 412.923 bits (223), Expect = 9.435e-113
Identity = 232/236 (98.31%), Postives = 232/236 (98.31%), Query Frame = 1

Query:        1 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGA 236
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct: 16619944 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAGTAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTCGAGTCTCTTAACAACAAATATGAT-GT-AAGA 16619711


Match Name	Summary
CM010796.2	E-Value: 3.299e-132, PID: 99.55 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]
CM010797.2	E-Value: 3.299e-132, PID: 96.28 Description: Cannabis sativa cultivar Purple Kush chromosome 6, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS61 vs. Genbank
Match Name: PKGMv1-56108_t
Description: No definition line

HSP 1 Score: 835.806 bits (452), Expect = 0.000e+0
Identity = 487/502 (97.01%), Postives = 487/502 (97.01%), Query Frame = 1

Query:     1335 GGGGTATATCCCATCCATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGGCTGAACAGGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAA 1836
                |||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      363 GGGGTACATCCCATCCCTTGAGGAGTATTTGAGCAATGCATGGATTTCATCTTCGGGGCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGC---------GGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGAAATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAA 855

HSP 2 Score: 379.683 bits (205), Expect = 1.262e-103
Identity = 211/214 (98.60%), Postives = 211/214 (98.60%), Query Frame = 1

Query:      922 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCG 1135
                |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct:       31 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGAATTTGCGAGAGATAGGTTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTGAGACACTTCACCAATGCCG 244

HSP 3 Score: 204.252 bits (110), Expect = 8.154e-51
Identity = 121/126 (96.03%), Postives = 121/126 (96.03%), Query Frame = 1

Query:     1166 AACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCGTGG-ACA 1290
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| || |||
Sbjct:      245 AACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAATGGTTGCAAATTAGTTTTACCTAATCTAAAGGGAGCGGGGTACA 370

[Close]

BLAST of TPS61 vs. Genbank
Match Name: PKGMv1-56109_t
Description: No definition line

HSP 1 Score: 771.173 bits (417), Expect = 0.000e+0
Identity = 441/452 (97.57%), Postives = 441/452 (97.57%), Query Frame = 1

Query:       67 ATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCC---CCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 515
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct:        1 ATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTCGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATAATATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCAATTACTACTACAATAATAAAGACATTAAAGATCCCCGCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTCCTTAGGCTTCATGGATATCAAGTTTCACAAGG 452

HSP 2 Score: 630.828 bits (341), Expect = 3.156e-179
Identity = 365/376 (97.07%), Postives = 365/376 (97.07%), Query Frame = 1

Query:      551 AAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct:      449 AAGGTGGTGGGACACATAATATCACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAATTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 824

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BLAST of TPS61 vs. Genbank
Match Name: PKGMv1-51696_t
Description: No definition line

HSP 1 Score: 771.173 bits (417), Expect = 0.000e+0
Identity = 441/452 (97.57%), Postives = 441/452 (97.57%), Query Frame = 1

Query:       67 ATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCC---CCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 515
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct:        1 ATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTCGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATAATATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCAATTACTACTACAATAATAAAGACATTAAAGATCCCCGCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTCCTTAGGCTTCATGGATATCAAGTTTCACAAGG 452

HSP 2 Score: 630.828 bits (341), Expect = 3.156e-179
Identity = 365/376 (97.07%), Postives = 365/376 (97.07%), Query Frame = 1

Query:      551 AAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct:      449 AAGGTGGTGGGACACATAATATCACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAATTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 824

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BLAST of TPS61 vs. Genbank
Match Name: PKGMv1-51695_t
Description: No definition line

HSP 1 Score: 414.77 bits (224), Expect = 3.460e-114
Identity = 246/256 (96.09%), Postives = 246/256 (96.09%), Query Frame = 1

Query:      610 GAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAA---GGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAG 862
                |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct:     4054 GAGGCCTCACATGTAGCTTTTGAGTGTGAGGACACTCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACTGCAACAAATATATTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGATGTAAAATGGCAAATAGAAGCTTATCGTCAACATGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTG-TTGATTTAG 4308


Match Name	Summary
PKGMv1-56108_t	E-Value: 1.262e-103, PID: 97.01 Description: No definition line [more]
PKGMv1-56109_t	E-Value: 3.156e-179, PID: 97.57 Description: No definition line [more]
PKGMv1-51696_t	E-Value: 3.156e-179, PID: 97.57 Description: No definition line [more]
PKGMv1-51695_t	E-Value: 3.460e-114, PID: 96.09 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS61 vs. Genbank
Match Name: NC_044371.1
Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence

HSP 1 Score: 880.126 bits (476), Expect = 0.000e+0
Identity = 589/638 (92.32%), Postives = 589/638 (92.32%), Query Frame = 1

Query:     1527 GGCTGAACAGGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAAA---CTAGCTAGGATGATGAGTCCTTTA-ATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAAAAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTATTATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTTTAAGTTTTTTAT-GTACAACTCTTCAAAGCACGTGAACGATG---TCTCCTGTACTTTGAGGAATTGA----GAATGTGTGTTTGTCGTTGGTGGTTGATCACTATAGCTAGTTGTTATGTATCGTGGTGATTTTAGTGTAATTTATATTCAGATAAA 2152
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||  ||||||               |||||||||||||||||||||||||||||||||||||||||| || |||||| | |||||| ||| |||||||||||||||||    ||||||||||||||||||||| |    ||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 93293809 GGCTGAACAGGAAAGAGGAGATGCTGCTTCTTCTATCGTATGTTATATGCAAGAAACGAAGAGCAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGAAATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGTCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAATAAAGTACTAGCTAGGATGATGAGTCCTTCATATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGGAAAAAA-AGGTGGTTAAGCAGTTTATTACAGGTTATGTG-TGATTA---------------ATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTT-AATTTTTTTTTAGTACAATTCTACAAAGCACGTGAACGATAATATCTCCTGTACTTTGAGGAATTAATTGCGAATGTGTGTTTGTCGTTGGTAGTTGATCACTATAGTTAGTTGTTATATATCGTGGTGATTTTAGTGTAATTTATATTCAGATAAA 93293190

HSP 2 Score: 750.86 bits (406), Expect = 0.000e+0
Identity = 417/422 (98.82%), Postives = 417/422 (98.82%), Query Frame = 1

Query:      502 CATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAAGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 923
                |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93296269 CATGTTT-TC-AGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGGTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAAGGTGACCCGGTTACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAG 93295850

HSP 3 Score: 508.949 bits (275), Expect = 1.149e-141
Identity = 283/287 (98.61%), Postives = 283/287 (98.61%), Query Frame = 1

Query:      229 AGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCCCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 515
                ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93297369 AGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATAAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATTTCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGG 93297083

HSP 4 Score: 431.39 bits (233), Expect = 2.559e-118
Identity = 241/245 (98.37%), Postives = 241/245 (98.37%), Query Frame = 1

Query:     1284 GTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCCATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGG 1528
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93294128 GTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCCCTTGAGGAGTATTTAAGCAATGCATGGATTTCATCTTCGGGGCCACTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGG 93293884

HSP 5 Score: 424.003 bits (229), Expect = 4.282e-116
Identity = 234/236 (99.15%), Postives = 234/236 (99.15%), Query Frame = 1

Query:        1 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGA 236
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 93297810 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGAT-GT-AAGA 93297577

HSP 6 Score: 412.923 bits (223), Expect = 9.270e-113
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1

Query:      922 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGT 1144
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93294726 AGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGT 93294504

HSP 7 Score: 263.345 bits (142), Expect = 9.879e-68
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1

Query:     1137 TGATAGGTGGGATGTACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCG 1284
                ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 93294410 TGACAGGTGGGATGTACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAACAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCG 93294263


Match Name	Summary
NC_044371.1	E-Value: 1.149e-141, PID: 92.32 Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS61 vs. Genbank
Match Name: XM_030635401.1
Description: PREDICTED: Cannabis sativa (E,E)-alpha-farnesene synthase (LOC115707439), mRNA

HSP 1 Score: 3637.17 bits (1969), Expect = 0.000e+0
Identity = 2104/2164 (97.23%), Postives = 2104/2164 (97.23%), Query Frame = 1

Query:        1 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCTGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATCCCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAAGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGTGGGATGTACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCGTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCCATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGGCTGAACAGGAAAGAGGAGATGCTGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAA---ACTAGCTAGGATGATGAGTCCTTTA-ATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAAAAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTATTATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTTTAAGTTTTTTAT-GTACAACTCTTCAAAGCACGTGAACGATG---TCTCCTGTACTTTGAGGAATTGA----GAATGTGTGTTTGTCGTTGGTGGTTGATCACTATAGCTAGTTGTTATGTATCGTGGTGATTTTAGTGTAATTTATATTCAGATAAA 2152
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Sbjct:        4 GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAAATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAACTATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGATCATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTTCCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCGGTCTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGACTTAAAGGGTATGCTAGAGCTGATAAACACCATCAGAAAACTAAGCTTGACATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTTCCGATTACTACTACAACAATAATGACATTAAAGATTTCCTCGTAGGAGACGATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATATCATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAAAAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATAGAGGTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAACTGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACAACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTTCCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGCTTATCGTCAAGGTGACCCGGTTACCAACACTACAACTACTACTAGTCTCTTGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAAAAAGATCTTAGGGAGTTGTCCAGTTGGTGGAAGAATGTGGGCCTTTCAGAGAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTGTGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACCAAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGGCTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGTGGGATGTACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCACTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAACAACGGTTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCGTGGACAGACTTTTGTAAATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCCCTTGAGGAGTATTTAAGCAATGCATGGATTTCATCTTCGGGGCCACTTCTTCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTTCTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGACTATGCAACGATTTAGGAACTTCAGCGGCTGAACAGGAAAGAGGAGATGCTGCTTCTTCTATCGTATGTTATATGCAAGAAACGAAGAGCAGTGAAGAGGAGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATCAACAAGAAATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATTTATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGTCTCTACCAATCTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTCTCCTTACTCGTTCACCCTCTCATTCCCAATAAATAAAGTACTAGCTAGGATGATGAGTCCTTCATATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGGAAAAAA-AGGTGGTTAAGCAGTTTATTACAGGTTATGTG-TGATTA---------------ATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAGTT-AATTTTTTTTTAGTACAATTCTACAAAGCACGTGAACGATAATATCTCCTGTACTTTGAGGAATTAATTGCGAATGTGTGTTTGTCGTTGGTAGTTGATCACTATAGTTAGTTGTTATATATCGTGGTGATTTTAGTGTAATTTATATTCAGATAAA 2149


Match Name	Summary
XM_030635401.1	E-Value: 0.000e+0, PID: 97.23 Description: PREDICTED: Cannabis sativa (E,E)-alpha-farnesene synthase (LOC115707439), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..57
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 25..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..24
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..57
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..47
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 48..60
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 30..573
None	No IPR available	PANTHER	PTHR31225:SF94		coord: 30..573
None	No IPR available	TMHMM	TMhelix		coord: 10..27
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 81..256 e-value: 5.2E-171 score: 571.4
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 268..531 e-value: 7.7E-96 score: 320.5
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 44..574 e-value: 5.2E-171 score: 571.4
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 265..589
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 44..230 e-value: 7.4E-34 score: 117.1
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 42..254

TPS61

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAA ATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAAC TATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGAT CATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTT CCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCTGT CTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGAC TTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGAC ATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTT CCGATTACTACTACAACAATAATGACATTAAAGATCCCCTCGTAGGAGAC GATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATA TCATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAA AAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATA GAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAAC TGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACA ACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTT CCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGC TTATCGTCAAGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCT TGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAA AAAGATCTTAGGGAGTTGTCCAGTTGGTGGAAGAATGTGGGCCTTTCAGA GAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTG TGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACC AAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGG CTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGTGGGATG TACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCA CTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGG TTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCGTGGACAGACTTTTGTA AATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCC ATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCT TCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTT CTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGA CTATGCAACGATTTAGGAACTTCAGCGGCTGAACAGGAAAGAGGAGATGC TGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGG AGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATC AACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATT TATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAAT CTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTC TCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAAACTAGCTAGGATGA TGAGTCCTTTAATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAA AAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTAT TATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAG TTTAAGTTTTTTATGTACAACTCTTCAAAGCACGTGAACGATGTCTCCTG TACTTTGAGGAATTGAGAATGTGTGTTTGTCGTTGGTGGTTGATCACTAT AGCTAGTTGTTATGTATCGTGGTGATTTTAGTGTAATTTATATTCAGATA AA
Sequence Length	2152
Sequence Checksum	b9c775a4bd949bbba541e50a8e83b7be

Sequence

GACTTGTAATATCATCGAAATTGAAAGACACAGGAAAAATATAAAAATAA
ATAAAAGATAAACATTATGGACACACAGAGAAAATTGCAAGCAGAGCAAC
TATCTTGCCCAACCAAGTCTCATGAACTAATATTTGATCATAAATCTGAT
CATCAAAGACGTTCGGCCAATTATACGCCAACCATTTGGAAATATGATTT
CCTGGAGTCTCTTAACAACAAATATGATAGTGAAGAGTACAAAAAGCTGT
CTGAGAAGCTTATCGAGGATGTGAGGCATATTATTGTTGAAACTAAAGAC
TTAAAGGGTATGCTAGAGCTGATTAACACCATCAGAAAACTAAGCTTGAC
ATATCATTTCGAAGACGAAGTCAAGAAAGTTCTTGACAAAATATCATCTT
CCGATTACTACTACAACAATAATGACATTAAAGATCCCCTCGTAGGAGAC
GATCTCTATCTCGCTGCATTATATTTCAGGCTTCTTAGGCTTCATGGATA
TCATGTTTCACAAGGCATATTTGTTGGGTACAATAGTGTGGATTACAAAA
AAGGTGGTGGGACACATAATATTACATCAACAGAGGTGAAAGTGATGATA
GAGCTTTTAGAGGCCTCACATGTAGCTTTTGAGTGTGAGGAGATGCTAAC
TGAGGCTAAAGCTTTGATGGAAGAAAACCTCAAAATTGCCTTTCCTGACA
ACGGCAACAAATATCTTCCCAAACATGAGGTGGTTCATGCTTTGGAACTT
CCATCTCATTGGAGGGTTCAGTGGTTTGACGTAAAATGGCAAATAGAAGC
TTATCGTCAAGGTGACCCGGATACCAACACTACAACTACTACTAGTCTCT
TGGTTGATTTAGCCAAATTAAACTTTAACATAGTTCAAGCCACACTTCAA
AAAGATCTTAGGGAGTTGTCCAGTTGGTGGAAGAATGTGGGCCTTTCAGA
GAAGTTGGATTTTGCGAGAGATAGGCTGGTCGAGAGCTTCATGTGTACTG
TGGGACTGGCTTTTCAGCCTGAATACAAAAGTCTGAGAAAATGTCTTACC
AAAGTGGTCAATTTCATACTCATTGTTGATGATGTTTATGATGTTTATGG
CTCATTGGAAGAGCTCAGACACTTCACCAATGCCGTTGATAGGTGGGATG
TACGGGAAACTGAAAAACTTCCAGATTGCATGAAGATTTGTTTCCAAGCA
CTCTACCATACTACATGTGAAATTGCTAGTGAAATTGAGACTAAGAACGG
TTGCAAGTTAGTTTTACCTCATCTAAAGGGAGCGTGGACAGACTTTTGTA
AATCACTATTAATGGAGGCAGAATGGTACCACAAGGGGTATATCCCATCC
ATTGAGGAGTATTTAAGCAATGCTTGGATTTCATCTTCGGGCCCTCTTCT
TCTTCTTCATTCATATCTTGCTATGCCAAATCAGACTAATACGGCCTCTT
CTCTTGACATAAGCAAAGATCTTGTCTACAACATTTCTCTCATCATTCGA
CTATGCAACGATTTAGGAACTTCAGCGGCTGAACAGGAAAGAGGAGATGC
TGCATCTTCTATCGTATGTTATATGCAAGAAACGAAGAGTAGTGAAGAGG
AGGCCCGAAAGCATATCCGAGAAATGATTAGAAAAACATGGAAGAAGATC
AACAAGACATGCTTTAGTACTTGCGGCAGTAGTTCACTATCATTATCATT
TATAGATATTGCCCTTAACACTGCTCGAGTGGCACATAGCCTCTACCAAT
CTGGAGATGCCTTCAGTGCTCAACATACAGACTATAAGACTCATATTCTC
TCCTTACTCGTTCACCCTCTCATTCCCAATAAGTAAACTAGCTAGGATGA
TGAGTCCTTTAATGGGTCACCATGTGTTTTCTTTTTTATAATTAATAGAA
AAATTTAGGTGGTTAAGCAGTTTATTACAGGTTATGTTATGATTAATTAT
TATTATTATTATTATTATTATTATTTGTTTTCTTTTTCATAGTAATTAAG
TTTAAGTTTTTTATGTACAACTCTTCAAAGCACGTGAACGATGTCTCCTG
TACTTTGAGGAATTGAGAATGTGTGTTTGTCGTTGGTGGTTGATCACTAT
AGCTAGTTGTTATGTATCGTGGTGATTTTAGTGTAATTTATATTCAGATA
AA

Sequence Length

2152

Sequence Checksum

b9c775a4bd949bbba541e50a8e83b7be

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS61
Identifier	TPS61
Time Accessioned	Saturday, December 21, 2024 - 17:46
Time Last Modified	Saturday, December 21, 2024 - 17:46