TPS9-like1 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR036965	Terpene_synth_N_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS9-like1 vs. Genbank
Match Name: AGQN03007528.1
Description: Cannabis sativa cultivar Purple Kush 007533F, whole genome shotgun sequence

HSP 1 Score: 475.709 bits (257), Expect = 9.399e-132
Identity = 279/290 (96.21%), Postives = 279/290 (96.21%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct:    16886 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGCGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAATGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 16597

HSP 2 Score: 438.776 bits (237), Expect = 1.233e-120
Identity = 263/275 (95.64%), Postives = 263/275 (95.64%), Query Frame = 1

Query:      135 TTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAG 409
                ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct:     3068 TTATAAACAAGGCCAAGTTGAAGAATTGAAA-AAGTGGTAAGAAAGGAGATATTTGGAGAATT--TATGTGATGATTGGA-TAATCGATTGAAGTTAATTGATGTGGTGCAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 2798

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BLAST of TPS9-like1 vs. Genbank
Match Name: AGQN03004425.1
Description: Cannabis sativa cultivar Purple Kush 004429F, whole genome shotgun sequence

HSP 1 Score: 466.476 bits (252), Expect = 5.657e-129
Identity = 260/264 (98.48%), Postives = 260/264 (98.48%), Query Frame = 1

Query:     1159 GAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAG 1422
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||
Sbjct:    10737 GAACAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCAATATTATTTGTCGGTTTATGGATGACATAGCTGAACACAAG 10474

HSP 2 Score: 464.629 bits (251), Expect = 2.034e-128
Identity = 277/290 (95.52%), Postives = 277/290 (95.52%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct:    63224 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 62935

HSP 3 Score: 453.549 bits (245), Expect = 4.404e-125
Identity = 350/401 (87.28%), Postives = 350/401 (87.28%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGT 808
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || || || ||| |||||||| |||||||| | ||||| || |||| |||||||| ||| ||||||| ||||||||||||||||||   | |  ||||||||   | || ||| || ||||||||||||||||| ||||| ||||||||||| ||||||   |  ||||| || ||| ||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||
Sbjct:    66427 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC-A--ATGATGATC--CATT-ATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 66033

HSP 4 Score: 390.763 bits (211), Expect = 3.502e-106
Identity = 219/223 (98.21%), Postives = 219/223 (98.21%), Query Frame = 1

Query:      805 AGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTAAACTCCTAACTGATGTAGTTAAAAGGT 1027
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct:    22989 AGGTGGTGTAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTGAACTCCTAACTGAGGCAGTTAAAAGGT 22767

HSP 5 Score: 377.837 bits (204), Expect = 2.726e-102
Identity = 220/227 (96.92%), Postives = 220/227 (96.92%), Query Frame = 1

Query:     1165 TTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGA---GCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTAT 1388
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct:    35994 TTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCATTTGTGGTTACTTA-TGTTGACAGTGATCAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCAATATTAT 35769

HSP 6 Score: 230.105 bits (124), Expect = 8.079e-58
Identity = 134/139 (96.40%), Postives = 134/139 (96.40%), Query Frame = 1

Query:     1024 AGGTGGGACATAAATGAGATTGATAAACTCAATCCAGGATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAG 1162
                ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct:    22448 AGGTGGGACATAAATGAGATTGATAAACTTAATCCAGGATATTTTCAAGTGTTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGATGAAACTTACAGAGTTCACTACGCAAAAGAAG 22310

HSP 7 Score: 141.466 bits (76), Expect = 3.894e-31
Identity = 151/187 (80.75%), Postives = 151/187 (80.75%), Query Frame = 1

Query:     1182 AGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 1368
                ||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| | || |||||| || |||| ||  |   ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct:    64186 AGGTTATTTTGAGGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGT-GATGGCTTGCTCTTT-A-TGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 64006

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BLAST of TPS9-like1 vs. Genbank
Match Name: AGQN03002522.1
Description: Cannabis sativa cultivar Purple Kush 002526F, whole genome shotgun sequence

HSP 1 Score: 464.629 bits (251), Expect = 2.034e-128
Identity = 277/290 (95.52%), Postives = 277/290 (95.52%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct:   108368 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 108657

HSP 2 Score: 451.703 bits (244), Expect = 1.584e-124
Identity = 350/401 (87.28%), Postives = 350/401 (87.28%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGT 808
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || || || ||| |||||||| |||||||| | ||||| || |||| |||||||| ||| ||||||| ||||||||||||||||||   | |  ||||||||   | || ||| || ||||||||||||||||| ||||| ||||||||||| ||||||   |  ||||| || ||| ||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||
Sbjct:   105179 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC-C-A--ATGATGATC--CATT-ATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 105572

HSP 3 Score: 448.01 bits (242), Expect = 2.049e-123
Identity = 264/275 (96.00%), Postives = 264/275 (96.00%), Query Frame = 1

Query:      135 TTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAG 409
                ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct:    98461 TTATAAACAAGGCCAAGTTGAAGAATTGAAAAAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAGTAATCGATTGAAGTTAATTGATGTGGTGCAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 98735

HSP 4 Score: 154.392 bits (83), Expect = 5.002e-35
Identity = 153/187 (81.82%), Postives = 153/187 (81.82%), Query Frame = 1

Query:     1182 AGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 1368
                ||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| | || |||||| || |||||||  |   |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct:   107399 AGGTTATTTTGAGGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 107582

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BLAST of TPS9-like1 vs. Genbank
Match Name: AGQN03002427.1
Description: Cannabis sativa cultivar Purple Kush 002431F, whole genome shotgun sequence

HSP 1 Score: 427.696 bits (231), Expect = 2.669e-117
Identity = 274/293 (93.52%), Postives = 274/293 (93.52%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCT-A--TATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |  ||| | || || |   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct:   110894 AGAATGAGCAAGAGAGAAATCATGTACTATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAAAAGAAGAAGCATGTGATGAAAGGAATAGGCGAGTGGTTATTTCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACTTCACCTAT-A-TTAGTTC---G-ATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCA 110608

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BLAST of TPS9-like1 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 185.785 bits (100), Expect = 1.774e-44
Identity = 143/164 (87.20%), Postives = 143/164 (87.20%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                ||||| ||||| |||||||| || ||||  || ||||||||||| |||||| | ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||   |||||||||||||
Sbjct: 52162564 GTTGAGGAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGCTTGGAAAAATCAATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 52162726

HSP 2 Score: 163.625 bits (88), Expect = 8.311e-38
Identity = 172/212 (81.13%), Postives = 172/212 (81.13%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAAT-AAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTT 406
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||  | |  ||||||| ||||||||||  ||  |||  |||| ||  || ||   |||||   |||||||||| |||  |  || ||||||||||||||||||||||||  ||||||||||
Sbjct: 52216327 TTATTA--TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAATTT-TGAT-CTTCTT-AAGG-ATGAAGAGTTGCATGATGTTTCCTTGTGGGTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 52216122

HSP 3 Score: 111.919 bits (60), Expect = 3.053e-22
Identity = 99/118 (83.90%), Postives = 99/118 (83.90%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||  | |  ||||||| | |||| |||
Sbjct: 52206604 TTATTA--TGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTGCAACCAAA 52206489

HSP 4 Score: 60.2131 bits (32), Expect = 1.122e-6
Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 1

Query:      348 TTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGAT 394
                ||| ||| ||| ||||  |||||||||||||||||||||||||||||
Sbjct: 52206469 TTTACATCATGTTTCTGATCGGTTTAGACTTCTACGACAACATGGAT 52206423

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BLAST of TPS9-like1 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 174.705 bits (94), Expect = 3.839e-41
Identity = 141/164 (85.98%), Postives = 141/164 (85.98%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                |||||  |||| |||||||| || ||||  || ||||||||||| |||||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||   |||||||||||||
Sbjct: 72023131 GTTGAGAAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 72023293

HSP 2 Score: 156.239 bits (84), Expect = 1.391e-35
Identity = 170/211 (80.57%), Postives = 170/211 (80.57%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTT 406
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||  | |  ||||||| ||||||||||  |  |||  |||| ||  || ||   | ||   ||||||||||| |||  |  || ||||||||||||||||||||||||  ||||||||||
Sbjct: 72111722 TTATTA--TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATATTTTTGAT-CTTCTT-AAGGAA-GA---TTTGCATGATGTTTCCTTGTGGGTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 72111520

HSP 3 Score: 132.232 bits (71), Expect = 2.344e-28
Identity = 97/110 (88.18%), Postives = 97/110 (88.18%), Query Frame = 1

Query:      204 TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||| ||||||||   |||||||||||||
Sbjct: 72050758 TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 72050867

HSP 4 Score: 54.6731 bits (29), Expect = 5.219e-5
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1

Query:      360 TTCTATTCGGTTTAGACTTCTACGACAACATGGAT 394
                |||| | ||||||||||||||||||||||||||||
Sbjct: 72050899 TTCTTTACGGTTTAGACTTCTACGACAACATGGAT 72050933


Match Name	Summary
AGQN03007528.1	E-Value: 9.399e-132, PID: 96.21 Description: Cannabis sativa cultivar Purple Kush 007533F, whole genome shotgun sequence [more]
AGQN03004425.1	E-Value: 5.657e-129, PID: 98.48 Description: Cannabis sativa cultivar Purple Kush 004429F, whole genome shotgun sequence [more]
AGQN03002522.1	E-Value: 2.034e-128, PID: 95.52 Description: Cannabis sativa cultivar Purple Kush 002526F, whole genome shotgun sequence [more]
AGQN03002427.1	E-Value: 2.669e-117, PID: 93.52 Description: Cannabis sativa cultivar Purple Kush 002431F, whole genome shotgun sequence [more]
CM010796.2	E-Value: 1.774e-44, PID: 87.20 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]
CM010792.2	E-Value: 3.839e-41, PID: 85.98 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
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BLAST of TPS9-like1 vs. Genbank
Match Name: PKGMv1-66366_t
Description: No definition line

HSP 1 Score: 134.079 bits (72), Expect = 8.594e-30
Identity = 212/277 (76.53%), Postives = 212/277 (76.53%), Query Frame = 1

Query:       47 ATAAAATTGTTCGACCAACAAAAA-ATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGA----GTTGAGTTATAAACAAGGCCAAGTTG-AAGAATTGAAAGAAGTAGTAAGAA--A-GGAGAT-ATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                ||||||||||||| || ||||||| ||| |||||||  |||||||||||| | |||  |||||||||||||||||||| ||||    ||||||  || || || |  |||| |  ||||  ||||  | | |  ||||  |   | || ||    ||  ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||  | |  ||||||| | |||| |||
Sbjct:       50 ATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACAATTCTTACATTACAATATTTCAGAACAAGATTTGGTTGAGGAATTAA-AA-G--AAGTGGTTAGAAGGGAAA-TATTTG-GAGAATCATCAATATCATCATCAG-CTTATTA--TGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTGCAACCAAA 316

HSP 2 Score: 60.2131 bits (32), Expect = 1.479e-7
Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 1

Query:      348 TTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGAT 394
                ||| ||| ||| ||||  |||||||||||||||||||||||||||||
Sbjct:      336 TTTACATCATGTTTCTGATCGGTTTAGACTTCTACGACAACATGGAT 382


Match Name	Summary
PKGMv1-66366_t	E-Value: 8.594e-30, PID: 76.53 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
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BLAST of TPS9-like1 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 459.089 bits (248), Expect = 9.299e-127
Identity = 276/290 (95.17%), Postives = 276/290 (95.17%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct: 78966497 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 78966208

HSP 2 Score: 459.089 bits (248), Expect = 9.299e-127
Identity = 351/401 (87.53%), Postives = 351/401 (87.53%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGT 808
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || || ||| |||||||| |||||||| | ||||| || |||| |||||||| ||| ||||||| ||||||||||||||||||   | |  ||||||||   | || ||| || ||||||||||||||||| ||||| ||||||||||| ||||||   |  ||||| || ||| ||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||
Sbjct: 78969936 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC-A--ATGATGATC--CATT-ATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 78969542

HSP 3 Score: 455.396 bits (246), Expect = 1.203e-125
Identity = 258/264 (97.73%), Postives = 258/264 (97.73%), Query Frame = 1

Query:     1159 GAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAG 1422
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||
Sbjct: 78947880 GAACAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAGGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCAATATTATTTGTCGGTTTATGGATGACATAGCGGAACACAAG 78947617

HSP 4 Score: 427.696 bits (231), Expect = 2.622e-117
Identity = 274/293 (93.52%), Postives = 274/293 (93.52%), Query Frame = 1

Query:     1421 AGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCT-A--TATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |  ||| | || || |   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 78937804 AGAATGAGCAAGAGAGAAATCATGTACTATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAAAAGAAGAAGCATGTGATGAAAGGAATAGGCGAGTGGTTATTTCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACTTCACCTAT-A-TTAGTTC---G-ATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCA 78937518

HSP 5 Score: 422.156 bits (228), Expect = 1.220e-115
Identity = 261/275 (94.91%), Postives = 261/275 (94.91%), Query Frame = 1

Query:      135 TTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAG 409
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 78976641 TTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACA---------TTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 78976376

HSP 6 Score: 374.144 bits (202), Expect = 3.465e-101
Identity = 216/223 (96.86%), Postives = 216/223 (96.86%), Query Frame = 1

Query:      805 AGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTAAACTCCTAACTGATGTAGTTAAAAGGT 1027
                |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||
Sbjct: 78948971 AGGTGGTGTAAAGAATCAGACTTCGTACACAAATTCCCTTTTTCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTGAACTCCTAACTGAGGCAGTAAAAAGGT 78948749

HSP 7 Score: 235.645 bits (127), Expect = 1.706e-59
Identity = 135/139 (97.12%), Postives = 135/139 (97.12%), Query Frame = 1

Query:     1024 AGGTGGGACATAAATGAGATTGATAAACTCAATCCAGGATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAG 1162
                ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 78948430 AGGTGGGACATAAATGAGATTGATAAACTTAATCCAGGATATTTTCAAGTGTTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCACTACGCAAAAGAAG 78948292

HSP 8 Score: 178.399 bits (96), Expect = 2.916e-42
Identity = 151/178 (84.83%), Postives = 151/178 (84.83%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGAT 327
                ||||| ||||| ||||||||  | ||||  || ||||||||||| |||||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||   |||||||||||||| |  ||| |||||
Sbjct: 77955198 GTTGAGGAATTAAAAGAAGTGATTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAATTAATATTGATGAT 77955374

HSP 9 Score: 169.165 bits (91), Expect = 1.755e-39
Identity = 172/211 (81.52%), Postives = 172/211 (81.52%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTT 406
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  ||||||| ||||||||||  |  | | |||||  |  | | ||| |||||  ||||||||||| |||  |  |||||||||||||||||||||||||||  ||||||||||
Sbjct: 78008671 TTATTA--TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGAT--T-TTCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 78008466

HSP 10 Score: 169.165 bits (91), Expect = 1.755e-39
Identity = 172/211 (81.52%), Postives = 172/211 (81.52%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTT 406
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  ||||||| ||||||||||  |  | | |||||  |  | | ||| |||||  ||||||||||| |||  |  |||||||||||||||||||||||||||  ||||||||||
Sbjct: 78019860 TTATTA--TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGAT--T-TTCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 78019655

HSP 11 Score: 154.392 bits (83), Expect = 4.914e-35
Identity = 153/187 (81.82%), Postives = 153/187 (81.82%), Query Frame = 1

Query:     1182 AGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 1368
                ||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| | || |||||| || |||||||  |   |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 78967722 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 78967539

HSP 12 Score: 111.919 bits (60), Expect = 3.000e-22
Identity = 99/118 (83.90%), Postives = 99/118 (83.90%), Query Frame = 1

Query:      196 TTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAA 313
                ||||||  ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||  | |  ||||||| | |||| |||
Sbjct: 77999328 TTATTA--TGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTGCAACCAAA 77999213

HSP 13 Score: 60.2131 bits (32), Expect = 1.102e-6
Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 1

Query:      348 TTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGAT 394
                ||| ||| ||| ||||  |||||||||||||||||||||||||||||
Sbjct: 77999193 TTTACATCATGTTTCTGATCGGTTTAGACTTCTACGACAACATGGAT 77999147


Match Name	Summary
NC_044377.1	E-Value: 9.299e-127, PID: 95.17 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS9-like1 vs. Genbank
Match Name: XM_030653866.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X1, mRNA

HSP 1 Score: 1845.92 bits (999), Expect = 0.000e+0
Identity = 1464/1690 (86.63%), Postives = 1464/1690 (86.63%), Query Frame = 1

Query:       25 TCATCAAAAAATGAGAAAATACATAAAATTGTTCGACCAACAAAAAATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTC-CTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTAAACTCCTAACTGATGTAGTTAAAAGGTGGGACATAAATGAGATTGATAAACTCAATCCAGGATGTTTTCAAGTATTTTATAAAGA-ACTTTTG-ATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAA-GAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||| |||||||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||||| |||||| | |||||| ||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || || ||| |||||||| |||||||| | ||||| || |||| |||||||| ||| ||||||| ||||||||||||||||||   | |  ||||||||   | || ||| || ||||||||||||||||| ||||| ||||||||||| ||||||   |  ||||| || ||| ||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||||||||| |||| ||||  || |||||| || || ||||||||| | |||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||| |||||||  |||||| | || || ||  | |||| || |||| |||||||| |||||||||||||||||||  |||||||||| ||| ||||| | ||| | | || | |||||||||| ||||   || ||||||||| |||||| ||  || ||   || |||||| || ||||||| | |  || ||| |||||||| |||| | ||  |||||| |||||||||| |||| | || | |||||||  |||||||  |||  |   ||||||| | || |||||| | ||||| || ||| | | |   ||| |||||||| || ||| |||| ||| ||  |||||| | || |||||| || |||||||  |   |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||   |  |||  | ||| | ||||| ||   ||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct:       75 TCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAAC---------ATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC-A--ATGATGATC--CATT-ATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTT-CCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAA-GATACTTTTGCAATCTTT-TGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGAT-A---CATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGCTAGGGCAAGCGCTAGTGTTTGTAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 1742

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BLAST of TPS9-like1 vs. Genbank
Match Name: XM_030622631.1
Description: PREDICTED: Cannabis sativa germacrene-A synthase-like (LOC115695574), mRNA

HSP 1 Score: 1247.61 bits (675), Expect = 0.000e+0
Identity = 1347/1672 (80.56%), Postives = 1347/1672 (80.56%), Query Frame = 1

Query:       47 ATAAAATTGTTCGACCAACAAAAAATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAA-GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGC-CTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTA-AACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTAAACTCCTAACTGATGTAGTTAAAAGGTGGGACATAAAT-GAGATTGATAAACTCAATCCAGG-ATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAGAATGAGCAAGA-GAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAA-TCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||| ||||||||| || |||||||| |  || |||  |||||||||||| |||||  |||||||||| |||||| || |||| |||  || | |||||    || ||||| ||||| ||||||||  | ||||  || ||||||||||| |||||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||   |||||||||||||| |  ||| |||||    |||||   ||     |    |||| |  ||| ||||| |||||||||||||||||||||||||  |   ||||||  ||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| || ||||||||||||||||||||||| ||||||||||||||||| || || ||| || ||||  ||||||| |||| |||| || || | |||||||| |||||||||||| || || ||||  |||||   | |||| || |||||||  |||||||||||||||||||||||||| ||||| ||||||||||| ||||||  | |  || || || |||||||||||||| |||||||||||||  |||| ||||||| ||| |||| ||||||||||||| |||||||||||| ||||||| | ||||||||||||||| ||||| |||  |  ||||||||||||||||||||| |||||||||||||| || ||||||||||| |||| ||| ||| | |||||||||||||||| ||| ||||||||||||||||||| |||||||||||  |||||| ||||||| ||  | || ||| |||| |||||||| ||||||||| ||||||||||  ||||||||||| | ||||||||| ||| | || |||||||||| |||||| | | | |||||||| |||| ||| || | | |||  ||||||||||||  |||||| |||||| ||||| |||||||||  |||   ||| |||||||| |||||||||||||| |||||||||| |||||| | |||  ||| |  | || ||||||||||| | || ||  | | ||  | || ||| ||||||||||| ||||| |||||||||| |||||  |||||||||||||  ||||||| | | ||||||||  |||||||||||| |   ||||||||||| ||| ||||||||||||||||||| ||||  |  |||||||| |  |||||   |||||||||| |||| ||||||||||||||||||||||||  |||| |||| ||  | | | | ||  ||  || ||||||| || ||||   || ||||||| |  ||||| ||| | | ||||||| |||||| || | |  | | |||||||||||||||||| ||||||||| |||  |||||||||| |||||||||||||||| ||||||| || || | |||  |||||||| |||||| | | ||||  ||| |||   |||||| | ||||||||| | ||||||||||  |||||||  ||||| ||| || ||||||||
Sbjct:       47 ATATAATTGTTCGTCCTACAAAAAAATTCCACCCAAATATTTGGGGAGAACGATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAA-CAAAAGGTTGAGGAATTAAAAGAAGTGATTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAATTAATATTGATGATGAAGATTTA---CA-----C----CATG-T--TTCAATTCGATTTAGACTTCTACGACAACATGGATTTACAATTTCTTCTGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTG-CTTTCACAACAACACACCTAAATGAGTTTTTGGCGAAGAA-AAAA--GAACAC--C-ATGAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTAAAT-CTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAGTTAGATTTCAATCTATTACAATGCATGCACAAAAAGGAACTTAGTGAAGTCAGCAGGTGGTGGAAAGAATCAGATTTTGTACACAAATTTCCATTTGCAAGAGATAGGATTGTAGAATTGTACCTTTGGATATTAGGAGTTTATTATGAACCCCAATACTGTTTGGCAAGAAATATTTTAATCAAAATCATAGCTTTGGCCTCAATTGCTGATGATATTTATGATGCATATGGTACACTTGAAGAACTTGAGCTCCTAACTCATGCAATTGAAAGGTGGGATATAAATTGTG-TAGATAAACTGAATC-AGGAATATATGCAAACATTTTATAAAGATGTTTTGAATTGTTACGAAGAGTTTGAGCAACTGCTAGAAAAAGAAGAAACATACAGAGTTCATTATGCAAAAGAAGCGTTTAAGGGATTAGTCCGATCTCATTTGGATGAAGCTCGATGTTTGCATAGAG--G-ACTCATCCCAAGTTTTGAAGAGTACTTGAAATTTGCTTTGGATAATTGTGGTTACTACATGTTGATACTAAGCTCTTTGGTTGGAATGAAAACT---AATATTGTAACAAAAGAAGTTTTTGAGTGGCTCTCGAAAGATCGAAAGATTATTAGAGCATCTGTTACTATTTGTAGGCTAATGGATGACATAGCTGAACACAAGTTTGAGGAAGATGATTA-TGAGGAACATTCAGCAGTAGAATGCTATATGATTGAACATGGCGTTTGTGAAGAGGAAGCCTATGATGAACTGAATAAGCTAATAATGAATGCATGGAAAGAAATAAATGAAGAGTTTGTGATGCCAACTGAAGTAGCTTCACCTATATTACTTCGTGCTCTTAACTTTTGT-AGGGTTATGGATCTTATTTTCAAATTTGGAGATGGTTATACAAACGTTGGAAAAATCACCAAAGATATTGTTGCTGCTTTGCTTATTCATCCAATTCCA 1683

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BLAST of TPS9-like1 vs. Genbank
Match Name: XM_030654009.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115724669), mRNA

HSP 1 Score: 1197.75 bits (648), Expect = 0.000e+0
Identity = 1345/1681 (80.01%), Postives = 1345/1681 (80.01%), Query Frame = 1

Query:       47 ATAAAATTGTTCGACCAACAAAAA-ATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAA-GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAAT------TAT--T-AT--G-------TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGC-CTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTA-AACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTAAACTCCTAACTGATGTAGTTAAAAGGTGGGACATAAATGAGATTGATAAACTCAATCCAGGATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCAT-T-CCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGT--TACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGAT 1701
                ||||||||||||| || ||||||| ||| |||||||  |||||||||||| |||||  |||||||||| |||||| || |||| |||  || | |||||    || ||||| ||||| || ||||| || ||||  || |||||||||||||      |||  | ||  |       ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  ||||||| ||||||||||  |  | | |||||  |  | | ||| |||||  ||||||||||| |||  |  |||||||||||||||||||||||||||  ||||||||||  ||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| |||||||||||||||||| ||||||| ||||||||||||||||| || || ||| || ||||  ||||||| |||| |||| || || | |||| | |  |||||||||||||  || ||||| ||||| |   ||||||| |||||| | || || |||||||||||||||||||| ||||||||||||||||| ||||||  | | | | || |||| |||||||||||| |||| ||||||||  |||| ||||||| ||| ||||||||||||||||||   |||||| ||| || |||| |||  |||||||||||||||||| |||| |  ||||||||||||||||||| |||||||||| |||||||||||||||||||| || | |||||| || || |||||||| |||| ||||||||||||||||||||||| |||||||||||  ||||||  |||||| ||  | ||| || |||| |||||||| ||||||||| ||||||| || |||||||||||| ||||||||||| | | | || |||||||||| ||||||   ||||||| |||||||| || || |||  ||  ||||||||| || ||||||| |||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||| ||  ||| |   ||| | ||||||||| | ||||| || |  | || ||  || | |||| |||||| |||||  || ||||||      | |||||||||  || |  ||||||| |||||| |||||  ||||||||||||  ||   ||||||||||||| | ||||||||||||||||||||||  |  |||||||| |  |||||   || ||||||| |||| ||||||||||||||||||||||||  |||| |||| | | || ||| |   ||| | || ||||  || ||||  ||| |||| || |  ||||||||| | | ||||||| | |||| ||   |  ||| |||||||||||||||||| ||||||||| |||| |||||| ||  ||||||||| |||||| ||||||  || ||| || | |||||||| ||||||||||||||||||||||||   | |||||| ||||||||||| |||||||||   |||||||  ||||| ||||||
Sbjct:       47 ATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACGATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAA-CAAAAGGTTGAGGAATTAAAGGAAGTGGTTAGAAGAGAAATATTTGGAGAATCATCAATATCATCATCAGCTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGAT--T-TTCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTTCTGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTG-CTTTCACAACAACACACTTGACCGAGTTTTTGGCAAG-AA-AAAAA-GAACACT---ATGATGACGATGATTTCTTGTCAAAAGAAATATCTCGAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAATGTT-CATGCTAAGCATTTCATTTCGATATGTGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGCCAGATTTTAATCTACTACAATCCCAGCACAAAAAGGAGCTTAGTGAAATCAGCAGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAACATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGAACATTTGAAGAACTTGAACTCCTAACTCAAGCAATTGAAAGGTGGGATATAAATTGCATTGATACACTCAATCAAGAATATTTGAAAACATTTTATAAGGATCTTTTGAATTGTTATGAAGAGTTTGAGCAAGTGCTTACAAAAGAAGAAACTTATAGAGTTCATTATGCAAAAGAAGTGTTTAAAGAGTTAATCCGATCATATTTTGATGAAGCTGGATGGTTGAATA--G-TGGAC--ATGTCCCAAATTTTGAAGAGTACATGGAATTTGCAACCATTAATTGTGGTNNTAAT--ATGTTGATAGTGAGTTCTTTGGTTGGAATGAAAAC-AAG--TATTGTAACCAAAGATGTTTTTGAGTGGCTCTCCAAAGATCGAAAGATTATTAGAGCATCTGTTATTATTTGTAGGCTCATGGATGACATAGCTGAACACAAGTTTGAGAAAGACAAATATGATGAAGATTCTGCCATTGAATCGTATATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAACTCAATAAGCTTATAATTAATGCATGGAAAGAAATAAATGAAGAGTTTTTGAAGCCAACTAAATTAGCTTCACCCATATTACTTCGTGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGATTCTGTTGCTGCTTTGCTAATTGAT 1704

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BLAST of TPS9-like1 vs. Genbank
Match Name: XM_030653867.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X2, mRNA

HSP 1 Score: 1005.7 bits (544), Expect = 0.000e+0
Identity = 708/786 (90.08%), Postives = 708/786 (90.08%), Query Frame = 1

Query:       25 TCATCAAAAAATGAGAAAATACATAAAATTGTTCGACCAACAAAAAATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGTGG 810
                ||||| |||||||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||||| |||||| | |||||| ||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || || ||| |||||||| |||||||| | ||||| || |||| |||||||| ||| ||||||| ||||||||||||||||||   | |  ||||||||   | || ||| || ||||||||||||||||| ||||| ||||||||||| ||||||   |  ||||| || ||| ||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||||
Sbjct:       75 TCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAAC---------ATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC-A--ATGATGATC--CATT-ATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGG 845

HSP 2 Score: 669.607 bits (362), Expect = 0.000e+0
Identity = 582/690 (84.35%), Postives = 582/690 (84.35%), Query Frame = 1

Query:     1023 AAGGTGGGACATAAATGAGATTGATAAACTCAATCCAGGATGTTTTCAAGTATTTTATAAAGA-ACTTTTG-ATTTGTTATGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATTACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTATGGATGACATAGCTGAACACAAGAATGAGCAAGAGAGAAATCATGTACCATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCCTGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGATTCAATTCCA 1710
                ||||||||||| ||||   || ||||||||| |||||| ||  || ||   || |||| |||| ||||||| | |  || ||| |||||||| |||| | ||  |||||| |||||||||| |||| | || | |||||||  |||||||  |||  |   ||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| | || |||||| || |||||||  |   |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||   |  |||  | ||| | ||||| ||   ||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||
Sbjct:      839 AAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTAT-AAGATACTTTTGCAATCTTT-TGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGCTAGGGCAAGCGCTAGTGTTTGTAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCA 1523

[Close]

BLAST of TPS9-like1 vs. Genbank
Match Name: XM_030622635.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695577), mRNA

HSP 1 Score: 749.013 bits (405), Expect = 0.000e+0
Identity = 788/971 (81.15%), Postives = 788/971 (81.15%), Query Frame = 1

Query:       47 ATAAAATTGTTCGACCAACAAAAA-ATTATCATCCATCTATTTGGGGAGATCGATTTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAAT-----T-AT--T-AT--G-------TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAAATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGC-CTTGTCTTTTACGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGCGATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAGACCCTTAAGAAAAACCCTA-AACAGGCTCCAAGCTAGGCATTTCATTTCAATATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAATTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAACTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAAGAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAACCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGCCACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAA 996
                ||||||||||||| || ||||||| ||| |||||||  |||||||||||| | |||  |||||||||| |||||| || |||| |||  || | ||||||   | ||||| ||||| |||||||| || ||||  || |||||||||||||     | ||  | ||  |       ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  ||||||| ||||||||||  |  | | |||||  |  | | ||| |||||  ||||||||||| |||  |  |||||||||||||||||||||||||||  ||||||||||  ||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| |||||||||||||||||| ||||||| || |||||||||||||| || |  ||| || ||||  ||||||| |||| |||| || || | |||| | ||||||||||||||||| |  ||||  || || |   ||||||| |||||| | || || ||||||||||||| |||||| ||||||||||||||||| ||||||  | |  || || |||| |||||| ||||| |  ||||||||||  |||| ||||||  ||| ||||||||||||||||||  ||||||||||| ||||||| |||||||||||| |||||||||| |||| |  ||||||||||||||||||| |||||||||| |||||||||||||||||||| || | |||||| || || |||||||| |||| ||||||||||||||||||||||| |||||||||||  ||||||  |||||| ||  | ||| || |||| |||||||| ||||||||| ||||||||||||||||||||
Sbjct:      105 ATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACAATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAAGAAAAGGTTGAGGAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGAATCATCATCATCATCATCAGCTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGAT--T-TTCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTTCTGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCTTCACATTTGAGTTGTGTTGTAGAAAATATACTTGATGAAGCACTTG-CTTTCACAACAACACACTTGATTGAGTTTTTGGCAAAGAC-AAAA--GATCACT---ATGATGACGATGATTTCTTGTCAAAAGAAATATCTCAAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAAT-CTTCATGCTAAGCATTTTATTTCGACGTATGAAAAAGATGCCTCACATAATAAAGTATTGCTACAACTTGCAAAGCTAGATTTCAATCTATTACAATCCATGCACAAAGAGGAGCTTAGTGAAATCAGCAGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAATATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGTACTTTTGAAGAA 1063


Match Name	Summary
XM_030653866.1	E-Value: 0.000e+0, PID: 86.63 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X1, mRNA [more]
XM_030622631.1	E-Value: 0.000e+0, PID: 80.56 Description: PREDICTED: Cannabis sativa germacrene-A synthase-like (LOC115695574), mRNA [more]
XM_030654009.1	E-Value: 0.000e+0, PID: 80.01 Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115724669), mRNA [more]
XM_030653867.1	E-Value: 0.000e+0, PID: 90.08 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X2, mRNA [more]
XM_030622635.1	E-Value: 0.000e+0, PID: 81.15 Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695577), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 68..240 e-value: 4.8E-180 score: 601.2
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 29..553 e-value: 4.8E-180 score: 601.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 241..569
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 246..514 e-value: 2.0E-97 score: 325.7
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 29..215 e-value: 9.1E-52 score: 175.5
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 10..569
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 10..569
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..28
None	No IPR available	TMHMM	TMhelix		coord: 9..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 62..78
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..39
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 40..61
None	No IPR available	TMHMM	TMhelix		coord: 40..62
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 26..237

TPS9-like1

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGTCCAACCAAATAATATTGGCATCATCAAAAAATGAGAAAATACATAA AATTGTTCGACCAACAAAAAATTATCATCCATCTATTTGGGGAGATCGAT TTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAA GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATT ATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTT TGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAA ATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTT GCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGG TTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAA GAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTC ACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTA CGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGC GATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAG ACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAA TATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAA TTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAA CTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAA GAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAA CCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGC CACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTA AACTCCTAACTGATGTAGTTAAAAGGTGGGACATAAATGAGATTGATAAA CTCAATCCAGGATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTA TGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATT ACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCT TGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAA ATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAA TTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTC TCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTAT GGATGACATAGCTGAACACAAGAATGAGCAAGAGAGAAATCATGTACCAT CTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACA TGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGA AGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCC TGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTAT ACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGA TTCAATTCCA
Sequence Length	1710
Sequence Checksum	59f476ab7461390538c17c078152e933

Sequence

ATGTCCAACCAAATAATATTGGCATCATCAAAAAATGAGAAAATACATAA
AATTGTTCGACCAACAAAAAATTATCATCCATCTATTTGGGGAGATCGAT
TTCTACATTACAATATTTCAGAAGAAGAGTTGAGTTATAAACAAGGCCAA
GTTGAAGAATTGAAAGAAGTAGTAAGAAAGGAGATATTTGGAGAATTATT
ATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTT
TGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAA
ATTTACAACAAAATAAGGATTAATGATACTAATTTAAAACATGAAACTTT
GCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATACAGGG
TTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAA
GAATGTTTGGCGAGTGACACTCTTGGTTTGCTTAGCTTATATGAGGCCTC
ACATTTGAGTTGCGTCGGGGAAGATTTACTAAATGAAGCCTTGTCTTTTA
CGACCAGACACCTAATTGAGTTTTTGGCAAATAATAAAAAAGAACAATGC
GATGATGATGATGATCTTTTATCGAAAGAAATATCTCGAGCCCTGGAGAG
ACCCTTAAGAAAAACCCTAAACAGGCTCCAAGCTAGGCATTTCATTTCAA
TATATGAAAAAGTGGCCTTACATAACCAAGCATTGCTACAACTTGCAAAA
TTAGATTTCAATTTATTACAGTCCATGCACAAAAAGGAGCTTAGCGAAAA
CTCCAGGTGGTGGAAAGAATCAGACTTTGTACACAAATTCCCTTTTGCAA
GAGACAGGAGTGTGGAACTATACCTTTGGATATTAGCAGTCTATTATGAA
CCCCAATACTATTTGGCAAGAATAATTTTATTCAAAATTATTTCCTTTGC
CACAATAGCTGATGACATTTATGATTCATATGGTACTTTTGAAGAACTTA
AACTCCTAACTGATGTAGTTAAAAGGTGGGACATAAATGAGATTGATAAA
CTCAATCCAGGATGTTTTCAAGTATTTTATAAAGAACTTTTGATTTGTTA
TGAAGAATTTGAGCAAGGGCTTACAAAGGAAGAAACTTACAGAGTTCATT
ACGCAAAAGAAGAGTTTAAAGAATTTCTCCAAGGTTATCTGGATGAAGCT
TGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAA
ATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAA
TTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTC
TCCAAAGGCCCCAAGATTATCAATGCATCCACTACTATTTGTCGGCTTAT
GGATGACATAGCTGAACACAAGAATGAGCAAGAGAGAAATCATGTACCAT
CTACAATAGAATGTTACATGAAACAATATGGCGTATCAGAAGAAGAAACA
TGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGA
AGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCCC
TGAATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTAT
ACACAAGTTGGAAAAGTTACCAAAGATAACGTTGCTGTCTTGCTCATTGA
TTCAATTCCA

Sequence Length

1710

Sequence Checksum

59f476ab7461390538c17c078152e933

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS9-like1
Identifier	TPS9-like1
Time Accessioned	Thursday, November 21, 2024 - 09:41
Time Last Modified	Thursday, November 21, 2024 - 09:41