TPS64 | ICGRC

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Sequences

Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR036965	Terpene_synth_N_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS64 vs. Genbank
Match Name: AGQN03000667.1
Description: Cannabis sativa cultivar Purple Kush 000667F, whole genome shotgun sequence

HSP 1 Score: 665.914 bits (360), Expect = 0.000e+0
Identity = 374/381 (98.16%), Postives = 374/381 (98.16%), Query Frame = 1

Query:      494 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCATCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 874
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   142470 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTAAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTCAAGGCAATGGAATTCACAAGATCTCATCTGAAAAATTCAATGCCTTTCATAACCCAAAAGCTACAAAATCAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATACGGCAAAGAATTAAACCATTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 142090

HSP 2 Score: 538.495 bits (291), Expect = 1.218e-150
Identity = 305/311 (98.07%), Postives = 305/311 (98.07%), Query Frame = 1

Query:      190 GACATAGAATGGATTTT---AT-TGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 496
                |||||||||||||||||    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   143884 GACATAGAATGGATTTTGTTGTATGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTAATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 143574

HSP 3 Score: 514.489 bits (278), Expect = 2.052e-143
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 1

Query:     1478 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1761
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   140335 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAATGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGCTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 140052

HSP 4 Score: 464.629 bits (251), Expect = 2.096e-128
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1

Query:     1230 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 1480
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   140658 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 140408

HSP 5 Score: 403.69 bits (218), Expect = 4.635e-110
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1

Query:      871 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 1091
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   141224 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTGGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 141004

HSP 6 Score: 261.498 bits (141), Expect = 2.952e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:     1090 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAAGTG 1230
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   140907 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAAGTG 140767

HSP 7 Score: 200.558 bits (108), Expect = 6.527e-49
Identity = 116/119 (97.48%), Postives = 116/119 (97.48%), Query Frame = 1

Query:       72 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGGG 190
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct:   144061 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCA---TTATTGTCAATAGATCATGATCCAGGGG 143946

HSP 8 Score: 134.079 bits (72), Expect = 6.714e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query:        1 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 72
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   144162 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 144091

[Close]

BLAST of TPS64 vs. Genbank
Match Name: CM010798.2
Description: Cannabis sativa cultivar Purple Kush chromosome 9, whole genome shotgun sequence

HSP 1 Score: 665.914 bits (360), Expect = 0.000e+0
Identity = 374/381 (98.16%), Postives = 374/381 (98.16%), Query Frame = 1

Query:      494 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCATCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 874
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40325864 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGATACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTCAAGGCAATGGAATTCACAAGATCTCATCTGAAAAATTCAATGCCTTTCATAACCCAAAAGCTACAAAATCAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTAAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATCAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 40325484

HSP 2 Score: 532.955 bits (288), Expect = 5.666e-149
Identity = 304/311 (97.75%), Postives = 304/311 (97.75%), Query Frame = 1

Query:      190 GACATAGAATGGATTTT---AT-TGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 496
                |||||||||||||||||    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40329208 GACATAGAATGGATTTTGTTGTATGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTAATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTATAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 40328898

HSP 3 Score: 514.489 bits (278), Expect = 2.052e-143
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 1

Query:     1478 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1761
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40323730 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCCGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGATCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 40323447

HSP 4 Score: 457.243 bits (247), Expect = 3.508e-126
Identity = 250/251 (99.60%), Postives = 250/251 (99.60%), Query Frame = 1

Query:     1230 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 1480
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40324052 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTC-AACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 40323803

HSP 5 Score: 403.69 bits (218), Expect = 4.635e-110
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1

Query:      871 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 1091
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40324617 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTTTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 40324397

HSP 6 Score: 261.498 bits (141), Expect = 2.952e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:     1090 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAAGTG 1230
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40324300 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAAGTG 40324160

HSP 7 Score: 200.558 bits (108), Expect = 6.527e-49
Identity = 116/119 (97.48%), Postives = 116/119 (97.48%), Query Frame = 1

Query:       72 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGGG 190
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct: 40329385 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCA---TTATTGTCAATAGATCATGATCCAGGGG 40329270

HSP 8 Score: 134.079 bits (72), Expect = 6.714e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query:        1 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 72
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40329486 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 40329415

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BLAST of TPS64 vs. Genbank
Match Name: CM010793.2
Description: Cannabis sativa cultivar Purple Kush chromosome 3, whole genome shotgun sequence

HSP 1 Score: 63.9064 bits (34), Expect = 8.934e-8
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 1

Query:      135 TATATCATCATCATCATCACCACCACCATTATTGTCA 171
                ||||||||||||||||||||||||||||| |||||||
Sbjct: 48377201 TATATCATCATCATCATCACCACCACCATCATTGTCA 48377165


Match Name	Summary
AGQN03000667.1	E-Value: 1.218e-150, PID: 98.16 Description: Cannabis sativa cultivar Purple Kush 000667F, whole genome shotgun sequence [more]
CM010798.2	E-Value: 5.666e-149, PID: 98.16 Description: Cannabis sativa cultivar Purple Kush chromosome 9, whole genome shotgun sequence [more]
CM010793.2	E-Value: 8.934e-8, PID: 97.30 Description: Cannabis sativa cultivar Purple Kush chromosome 3, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS64 vs. Genbank
Match Name: PKGMv1-78285_t
Description: No definition line

HSP 1 Score: 649.294 bits (351), Expect = 0.000e+0
Identity = 355/357 (99.44%), Postives = 355/357 (99.44%), Query Frame = 1

Query:     1405 ATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1761
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:        1 ATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCCGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGATCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 357

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BLAST of TPS64 vs. Genbank
Match Name: PKGMv1-78286_t
Description: No definition line

HSP 1 Score: 568.042 bits (307), Expect = 2.048e-160
Identity = 321/328 (97.87%), Postives = 321/328 (97.87%), Query Frame = 1

Query:      547 ATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCATCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 874
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:        1 ATGGGCCAAGATACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTCAAGGCAATGGAATTCACAAGATCTCATCTGAAAAATTCAATGCCTTTCATAACCCAAAAGCTACAAAATCAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTAAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATCAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 328

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BLAST of TPS64 vs. Genbank
Match Name: PKGMv1-78287_t
Description: No definition line

HSP 1 Score: 503.409 bits (272), Expect = 5.858e-141
Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 1

Query:      219 GATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 496
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      210 GATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTAATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTATAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 487

HSP 2 Score: 198.712 bits (107), Expect = 3.096e-49
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 1

Query:       72 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGG 189
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct:       96 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCAT---CACCACCATTATTGTCAATAGATCATGATCCAGGG 210

HSP 3 Score: 122.999 bits (66), Expect = 1.917e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1

Query:        7 ATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 72
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:        1 ATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 66

[Close]

BLAST of TPS64 vs. Genbank
Match Name: PKGMv1-74914_t
Description: No definition line

HSP 1 Score: 63.9064 bits (34), Expect = 1.178e-8
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 1

Query:      135 TATATCATCATCATCATCACCACCACCATTATTGTCA 171
                ||||||||||||||||||||||||||||| |||||||
Sbjct:     3543 TATATCATCATCATCATCACCACCACCATCATTGTCA 3507


Match Name	Summary
PKGMv1-78285_t	E-Value: 0.000e+0, PID: 99.44 Description: No definition line [more]
PKGMv1-78286_t	E-Value: 2.048e-160, PID: 97.87 Description: No definition line [more]
PKGMv1-78287_t	E-Value: 5.858e-141, PID: 99.28 Description: No definition line [more]
PKGMv1-74914_t	E-Value: 1.178e-8, PID: 97.30 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS64 vs. Genbank
Match Name: NC_044379.1
Description: Cannabis sativa chromosome 8, cs10, whole genome shotgun sequence

HSP 1 Score: 682.534 bits (369), Expect = 0.000e+0
Identity = 377/381 (98.95%), Postives = 377/381 (98.95%), Query Frame = 1

Query:      494 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCATCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 874
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53366012 CAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTCAAGGCAATGGAATTCACAAGATCTCATCTGAAAATTTCGATGCCTTTCATAACCCAAAAGCTACAAAATCAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGATGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGT 53366392

HSP 2 Score: 538.495 bits (291), Expect = 1.196e-150
Identity = 305/311 (98.07%), Postives = 305/311 (98.07%), Query Frame = 1

Query:      190 GACATAGAATGGATTTTAT----TGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 496
                |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53364598 GACATAGAATGGATTTTATTGTATGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGCTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAAATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAG 53364908

HSP 3 Score: 514.489 bits (278), Expect = 2.016e-143
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 1

Query:     1478 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1761
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53368142 AGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAATGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGCTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 53368425

HSP 4 Score: 459.089 bits (248), Expect = 9.582e-127
Identity = 250/251 (99.60%), Postives = 250/251 (99.60%), Query Frame = 1

Query:     1230 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 1480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53367817 GTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAATGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGG 53368067

HSP 5 Score: 409.23 bits (221), Expect = 9.787e-112
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1

Query:      871 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 1091
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53367246 AGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAG 53367466

HSP 6 Score: 250.418 bits (135), Expect = 6.278e-64
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1

Query:     1090 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAA 1227
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 53367563 AGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCATTACACAACACTTAAAGAAA 53367700

HSP 7 Score: 178.399 bits (96), Expect = 3.005e-42
Identity = 112/119 (94.12%), Postives = 112/119 (94.12%), Query Frame = 1

Query:       72 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGGG 190
                |||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53364421 GAAGAAAAATTATAAGCTTCCTCGTTTTGGTAATTCATTATCCATGTCAGCAAAATGCCAGAGTAT---ATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGGG 53364536

HSP 8 Score: 134.079 bits (72), Expect = 6.596e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query:        1 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 72
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53364320 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 53364391


Match Name	Summary
NC_044379.1	E-Value: 1.196e-150, PID: 98.95 Description: Cannabis sativa chromosome 8, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS64 vs. Genbank
Match Name: XM_030626238.1
Description: PREDICTED: Cannabis sativa probable terpene synthase 11 (LOC115699029), mRNA

HSP 1 Score: 2784.02 bits (1507), Expect = 0.000e+0
Identity = 1531/1543 (99.22%), Postives = 1531/1543 (99.22%), Query Frame = 1

Query:      219 GATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCATCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCGTTACACAACACTTAAAGAAAGTGTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1761
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      270 GATGGTCGCTGATTATTATGACAATTATAAGAGTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGAAAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCAACGGCTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTCAAATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGGCTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAGATGTTTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGGGCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCAGCAAATTGTGAAGAATCATTGGTCAAGGCAATGGAATTCACAAGATCTCATCTGAAAATTTCGATGCCTTTCATAACCCAAAAGCTACAAAATCAAGTTGCCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCTCGAAACTACATCGATGAATATGGCAAAGAATTAAACCACTGCCCTGCTCTTCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAAGAGAATTAACCGAGATCATAAGGTGGTGGAAACAGTTGGGTCTGGTTGAGAAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGTGGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCAAAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGATCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAGATGGGATCTTGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCACTATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGATTATGCATTACACAACACTTAAAGAAAACGTGGTTAGACATATTTGATGCATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAGAGCAATATTTAACAAATGGCGTAACTAGTGGAGGATCCTACATGGCCTTAGTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATCAATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAAGACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGATGTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGAAGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAGAGCTAAATGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACCACGGCCTGCTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGGAGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTTTTCGACCCTGT 1812

HSP 2 Score: 176.552 bits (95), Expect = 8.059e-43
Identity = 111/118 (94.07%), Postives = 111/118 (94.07%), Query Frame = 1

Query:       72 GAAGAAGAATTATAAGCTTCCTCGTTTTGGTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGG 189
                |||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      156 GAAGAAAAATTATAAGCTTCCTCGTTTTGGTAATTCATTATCCATGTCAGCAAAATGCCAGAGTAT---ATCATCATCATCACCACCACCATTATTGTCAATAGATCATGATCCAGGG 270

HSP 3 Score: 134.079 bits (72), Expect = 4.920e-30
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query:        1 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 72
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:       55 ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGCTACTTTCTCAAAGAGGCCATCG 126


Match Name	Summary
XM_030626238.1	E-Value: 8.059e-43, PID: 99.22 Description: PREDICTED: Cannabis sativa probable terpene synthase 11 (LOC115699029), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..46
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..45
None	No IPR available	TMHMM	TMhelix		coord: 27..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..46
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..37
None	No IPR available	TMHMM	TMhelix		coord: 20..37
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..51
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..54
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 55..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..33
None	No IPR available	PANTHER	PTHR31225:SF60		coord: 30..513
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 30..513
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 30..189 e-value: 7.4E-178 score: 594.0
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 10..496 e-value: 7.4E-178 score: 594.0
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 192..513
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 195..459 e-value: 4.6E-97 score: 324.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 16..164 e-value: 1.4E-37 score: 129.3
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 7..187

TPS64

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGC TACTTTCTCAAAGAGGCCATCGAAGAAGAATTATAAGCTTCCTCGTTTTG GTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCA TCACCACCACCATTATTGTCAATAGATCATGATCCAGGGGACATAGAATG GATTTTATTGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGA GTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGA AAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCA ACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTC AGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGG CTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAGATGT TTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGG GCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCA GCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCA TCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTG CCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCT CGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCT TCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAA GAGAATTAACCGAGATCATAAGGTGGTGGAAACAGTTGGGTCTGGTTGAG AAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGT GGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCA AAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGA TCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAGATGGGATCT TGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCAC TATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGA TTATGCGTTACACAACACTTAAAGAAAGTGTGGTTAGACATATTTGATGC ATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAG AGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTA GTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATC AATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAA GACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGAT GTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGA AGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAG AGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACC ACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGG AGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTT TTCGACCCTGT
Sequence Length	1761
Sequence Checksum	a330ed0cc214771c062f47c85a440fe9

Sequence

ATGCAAATGGCAGGAGTGAAGTTCATTAGCTACTCATCTTTATACTCGGC
TACTTTCTCAAAGAGGCCATCGAAGAAGAATTATAAGCTTCCTCGTTTTG
GTAATCCATTATTCATGTCAACAAAATGCCAGAGTATATCATCATCATCA
TCACCACCACCATTATTGTCAATAGATCATGATCCAGGGGACATAGAATG
GATTTTATTGAATAATTAGATGGTCGCTGATTATTATGACAATTATAAGA
GTACTACCTCGGAAGAGCTGTTGATCAAAAAGGTTGAAATGGCATTACGA
AAACCTACTGATGATCAAAGTTACAAAATGAGGCTCATAGATAGCATCCA
ACGGTTGGGAGTTGGCCATTATTTCGAAGAAGAAATCAAAGTAATCCTTC
AGATGTTGTCAGATTTCAATTCCGGCCAAGATGACCTCTTTAACACGGGG
CTTCGTTTTCGGCTACTCAGGCATAATGGCTTTCCAACTACCTCAGATGT
TTTTGACAAATTCATCAACCAAAAAGGAGAAATAGAGGATGTAATAATGG
GCCAAGACACATTGGGTATGCTGAGCTTGTATGAGGCATCCTACCTTGCA
GCAAATTGTGAAGAATCATTGGTGAAGGCAATGGAATTCACAAGATCTCA
TCTGAAAAGTTCGATGCCTTTCATAACCCAAAAGCTACAAAATGAAGTTG
CCAAAGCCTTGGAGCTCCCTAGACACCTGAGGATGGCACCATTAGAAGCT
CGAAACTACATCGACGAATATGGCAAAGAATTAAACCACTGCCCTGCTCT
TCTTGACTTAGCCAAGTTAGAATTTAACGAGCTTCAGTCACTCCACAAAA
GAGAATTAACCGAGATCATAAGGTGGTGGAAACAGTTGGGTCTGGTTGAG
AAACTTGGTTTTGCAAGAGATCGACCCTTAGAATGTTTTCTATGGGTAGT
GGGAATATTCCCTGGGAAATGCTATTCCAACGTCCGGATTGAGCTGGCCA
AAACTGTTTCAATCTTACTAGTCATTGATGATATCTACGACACTTACGGA
TCTTTGGATGAACTCCACTTGTTCAATCATGCAATTCTAAGATGGGATCT
TGGTGCAATGGACAAGCTTCCTGAGTACATGAAAATATGTTACATGGCAC
TATACAATACTACTAATGAAATTGGCTACAGAGTTCTCAAAGAACATGGA
TTATGCGTTACACAACACTTAAAGAAAGTGTGGTTAGACATATTTGATGC
ATTTCTAACCGAAGCAGAATGGTTCGACAAAAAATACACTCCAACTCTAG
AGCAATATTTAACAAACGGCGTAACTAGTGGAGGATCCTACATGGCCTTA
GTGCACTCATTTTTCCTCATAGGTCATGGTATTACAGACCAAACTATATC
AATGATGCACCCATATCCTGAGATCTTCTCCCACTCAGGCAAAATTCTAA
GACTTTGGGATGATTTGGGAACAGCCAAGGAGGAGCAAGAGAGAGGAGAT
GTTGCTTCTAGCATAGATTGTTATATGAAAGAAGAGAATATTGAATCGGA
AGATGAGGCCAGAAAACACATCAAGAAACTGATTAGAAGCTCGTGGATAG
AGCTAAACGGAGAGTTGAAGGCTCCTAGTGCATTGCCTCGGTCGATCACC
ACGGCCTGTTTTGACCTTGCTAGAACAGCCCAAGTCATCTATCAACATGG
AGATGATCAAAGCTTTTTAAGCGTAGAAGATCATGTACAATCTTTGTTTT
TTCGACCCTGT

Sequence Length

1761

Sequence Checksum

a330ed0cc214771c062f47c85a440fe9

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS64
Identifier	TPS64
Time Accessioned	Friday, April 19, 2024 - 01:12
Time Last Modified	Friday, April 19, 2024 - 01:12