TPS49 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS49 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 669.607 bits (362), Expect = 0.000e+0
Identity = 385/394 (97.72%), Postives = 385/394 (97.72%), Query Frame = 1

Query:      346 GATATATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGT 739
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38323110 GATATATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGT---------GCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGT 38323494

HSP 2 Score: 536.649 bits (290), Expect = 4.061e-150
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 1

Query:     1343 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCC 1632
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38325078 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCC 38325367

HSP 3 Score: 514.489 bits (278), Expect = 1.903e-143
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1

Query:       69 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTG 346
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38322738 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTG 38323015

HSP 4 Score: 460.936 bits (249), Expect = 2.514e-127
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1

Query:     1096 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 1344
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38324693 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 38324941

HSP 5 Score: 409.23 bits (221), Expect = 9.237e-112
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1

Query:      738 GTGGTGGAAAGACTTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGT 958
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38323634 GTGGTGGAAAGACTTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGT 38323854

HSP 6 Score: 257.805 bits (139), Expect = 3.541e-66
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1

Query:      957 GTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACA 1095
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38323982 GTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACA 38324120

HSP 7 Score: 130.386 bits (70), Expect = 8.053e-28
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1

Query:        1 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGG 70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38322498 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGG 38322567

HSP 8 Score: 124.846 bits (67), Expect = 3.747e-26
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1

Query:        1 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGG 70
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37393436 CGTCGGTCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGG 37393505


Match Name	Summary
CM010796.2	E-Value: 4.061e-150, PID: 97.72 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS49 vs. Genbank
Match Name: PKGMv1-48800_t
Description: No definition line

HSP 1 Score: 1463.67 bits (792), Expect = 0.000e+0
Identity = 822/834 (98.56%), Postives = 822/834 (98.56%), Query Frame = 1

Query:      799 GGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCC 1632
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     6244 GGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAA------------CTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCC 7065

HSP 2 Score: 566.195 bits (306), Expect = 6.831e-160
Identity = 329/338 (97.34%), Postives = 329/338 (97.34%), Query Frame = 1

Query:      357 GAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACG 694
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     5916 GAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGT---------GCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACG 6244

HSP 3 Score: 418.463 bits (226), Expect = 2.024e-115
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1

Query:       69 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACG 294
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     5691 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACG 5916


Match Name	Summary
PKGMv1-48800_t	E-Value: 6.831e-160, PID: 98.56 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS49 vs. Genbank
Match Name: NC_044371.1
Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence

HSP 1 Score: 712.08 bits (385), Expect = 0.000e+0
Identity = 391/394 (99.24%), Postives = 391/394 (99.24%), Query Frame = 1

Query:      346 GATATATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGT 739
                ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64562424 GATATATTTGAGAAGTTTACAAACAAAGAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTTGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCCTTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGT 64562817

HSP 2 Score: 531.109 bits (287), Expect = 1.856e-148
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 1

Query:     1343 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC 1635
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 44588763 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAACAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAAATCTTCCCCTC 44588471

HSP 3 Score: 531.109 bits (287), Expect = 1.856e-148
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 1

Query:     1343 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC 1635
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 64564322 AGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAACAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCACTC 64564614

HSP 4 Score: 496.022 bits (268), Expect = 6.772e-138
Identity = 275/278 (98.92%), Postives = 275/278 (98.92%), Query Frame = 1

Query:       69 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTG 346
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64562027 GGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTG-CCCCAACATTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAGAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTG 64562303

HSP 5 Score: 460.936 bits (249), Expect = 2.470e-127
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1

Query:     1096 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 1344
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44589140 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 44588892

HSP 6 Score: 460.936 bits (249), Expect = 2.470e-127
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1

Query:     1096 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 1344
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64563935 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAG 64564183

HSP 7 Score: 381.53 bits (206), Expect = 1.978e-103
Identity = 216/221 (97.74%), Postives = 216/221 (97.74%), Query Frame = 1

Query:      738 GTGGTGGAAAGACTTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGT 958
                ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64562958 GTGGTGGAATGGCTTGGACTTTGCGTCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTGTACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACCAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGT 64563178

HSP 8 Score: 252.265 bits (136), Expect = 1.618e-64
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 1

Query:      957 GTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACA 1095
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64563274 GTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGGGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACA 64563412

HSP 9 Score: 124.846 bits (67), Expect = 3.681e-26
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1

Query:        1 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGG 70
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 64561797 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTGAAATATACCCATCAATCATTGG 64561866


Match Name	Summary
NC_044371.1	E-Value: 1.856e-148, PID: 99.24 Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of TPS49 vs. Genbank
Match Name: XM_030635217.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115707304), mRNA

HSP 1 Score: 2931.75 bits (1587), Expect = 0.000e+0
Identity = 1620/1636 (99.02%), Postives = 1620/1636 (99.02%), Query Frame = 1

Query:        1 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAAATATACCCATCAATCATTGGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCA-TTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTGATATATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGTGGTGGAAAGACTTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC 1635
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:       92 CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTGAAATATACCCATCAATCATTGGAAGTTGATGATAATACAAAGCAAGAAGTTGAAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCC-AACANTTAATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGTCGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAGAAATGAAGAAAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCCCTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTGATATATTTGAGAAGTTTACAAACAAAGAAGGAAAACTGGACGATAGTGTTAGTAGTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATCCATGGAGAGCCTATACTTGAAGAAGCAGTTGTTTTCACCACAACTCATTTGGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCCTTATTTCTTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTGCCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAACCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCCAAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGTGGTGGAATGGCTTGGACTTTGCGTCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGGTTATATTTGGCCTGTGGGAGTGTACTTTGAGCCAAAGTACAGTGCTGCTAGGGTTATATTGACCAAAGTAATTGGTGTGACAACAATGATTGATGACATTTATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAATAGAAAAGTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAATATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGGGGAGGAGTTGGCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAACAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCACTC 1726

[Close]

BLAST of TPS49 vs. Genbank
Match Name: XM_030631298.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase (LOC115704075), mRNA

HSP 1 Score: 987.231 bits (534), Expect = 0.000e+0
Identity = 538/540 (99.63%), Postives = 538/540 (99.63%), Query Frame = 1

Query:     1096 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC 1635
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct:        1 ATGAAGAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGTACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACGTACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTCAGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCATCAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAGCAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATATAATGTAACAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAGATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCCATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGTTTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTTTTGTCAAATCTTTGTTTATTCAAAATCTTCCCCTC 540


Match Name	Summary
XM_030635217.1	E-Value: 0.000e+0, PID: 99.02 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115707304), mRNA [more]
XM_030631298.1	E-Value: 0.000e+0, PID: 99.63 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase (LOC115704075), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 10..527 e-value: 5.5E-207 score: 690.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 218..541
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 223..488 e-value: 4.1E-112 score: 373.9
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 49..217 e-value: 5.5E-207 score: 690.1
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 10..192 e-value: 8.4E-58 score: 195.2
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..542
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 1..542
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..60
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	TMHMM	TMhelix		coord: 4..26
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 7..218

TPS49

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAA ATATACCCATCAATCATTGGAAGTTGATGATAATACAAAGCAAGAAGTTG AAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATT AATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGT CGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGA AAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCC CTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTGATAT ATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTA GTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATC CATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTT GGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTC TTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTG CCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAA CCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCC AAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGTGGTGGAAAGAC TTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGG TTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTA GGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATT TATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAAT AGAAAAGTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAAT ATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTG GCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAA GAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGT ACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACG TACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTC AGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCAT CAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAG CAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATA TAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAG ATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCC ATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGT TTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTT TTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC
Sequence Length	1635
Sequence Checksum	147f3de82298e6e33796d7b0a2da5d9b

Sequence

CGTCGATCGGCCAATTTTCATCCTAGTATCTGGGGAGATCACTTTCTCAA
ATATACCCATCAATCATTGGAAGTTGATGATAATACAAAGCAAGAAGTTG
AAAAACTAAAAGAGGAAGTGAGAGGGATGCTAACTGCTGCCCCCAGCATT
AATTCTTCCCAAAAGCTACAGTTAATTGATACAATCCAACGGTTAGGAGT
CGCTTATCATTTTGAGAGCGAAATCAGTGACATTTTGGGAAAAATGAAGA
AAATCAATCCTCACACTGAATTGGATAATAGTACCCTTCATACGGTCTCC
CTTTGGTTTCGATTGCTTAGACAACAAGGATACAACATATCAAGTGATAT
ATTTGAGAAGTTTACAAACAAAAAAGGAAAACTGGACGATAGTGTTAGTA
GTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCTTCACATATGAGAATC
CATGGAGAGCCTATACTTGAAGAAGCAGTAGTTTTCACCACAACTCATTT
GGTGGAGGCCTCTAAGGAGAAATCCCAGTTGACCATGAGCTCATTATTTC
TTGCGGCACAAGTCAACCATGCCTTAAGACAGCCCATCTTGAAGGGCTTG
CCAAGAGTAGAAATTCAACGCTTTATTTCTCTCTATCATCACGACCCTAA
CCACAGTCATCTTTTGCTTCGCTTTGCTAAATTGGACTTCAACGTTCTCC
AAAAGTTGCACCAGAAGGAACTTCATGAAATTTCAAAGTGGTGGAAAGAC
TTGGACTTTGCATCGAAGCTACCTTTCGCACGTGACAGACTAGTCGAGGG
TTATATTTGGCCTGTGGGAGTATACTTTGAGCCAAAGTACAGTGCTGCTA
GGGTTATATTGACAAAAGTAATTGGTGTGACAACAATGATTGATGACATT
TATGATGTTTATGGAACTTTAGAAGAACTGGAACTCTTCACAGACGCAAT
AGAAAAGTGGGATATAAGCTGCAGTGATCAACTCCCTGATTACATGAAAT
ATTGTTACGAGGCACTGTTAAAATTATACGATGAAATTGAGGAGGAGTTG
GCCATGCAAGGCAGAACTTATCGGATGGCCTATGCAAAGGAGACAATGAA
GAAGCTAGCTCAATCCTACTACGTGGAAGCTCAATGGTTTCATAAAAAGT
ACACACCAACGTTACAGGAATATATGGAGGTTGCACTGGTGTCATCCACG
TACTACATGCTCACTGCCACGTCATTCCTAGGAATGGGAGAAGAAGTCTC
AGCTGAGGTCTTTCATTGGCTTATGAACTCTCCTAAGATTGTAACAGCAT
CAGCAGTAGTTTGCAGACTCATGGATGATGTGGTCAGCCACAAGTTTGAG
CAAGATAGAGGACACGTGGACTCTAGCGTGGAATGTTATATGAAGCAATA
TAATGTAAGAGAAGAAGAAGCGTGCAAAGAATTGAAGAAACAAGTTTTAG
ATGCATGGAAAGAAATGAATGAGGAGTGCATGGAGCCAAGAGATGTGCCC
ATGTCTGTCCTCATGCGCGTGGTCAATCTCGGACGAGTGATCGATGCTGT
TTACAAAGATGGAGACGGTTACACCCATGCCGGAGGAATCATGAAGACTT
TTGTCAAATCTTTGTTTATTCAAACTCTTCCCCTC

Sequence Length

1635

Sequence Checksum

147f3de82298e6e33796d7b0a2da5d9b

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS49
Identifier	TPS49
Time Accessioned	Tuesday, April 23, 2024 - 10:14
Time Last Modified	Tuesday, April 23, 2024 - 10:14