TPS58 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR036965	Terpene_synth_N_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS58 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 689.921 bits (373), Expect = 0.000e+0
Identity = 379/382 (99.21%), Postives = 379/382 (99.21%), Query Frame = 1

Query:      184 GACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT 565
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct:   791676 GACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACCTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTACATAACGAGGT 792057

HSP 2 Score: 510.796 bits (276), Expect = 2.181e-142
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 1

Query:     1171 AAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAATT 1452
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct:   794035 AAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCCCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATAATCAATCCAATT 794316

HSP 3 Score: 483.096 bits (261), Expect = 4.755e-134
Identity = 342/382 (89.53%), Postives = 342/382 (89.53%), Query Frame = 1

Query:      188 TATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT-GGT 568
                |||| | ||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||  |||||||||| ||||| |||||||| ||||||||||||||| | |||| |||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | | |||||| |||||| || ||| |||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| |||
Sbjct:  8269939 TATTTGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTCGCAGAGAAGAAATACTAGATGAAGCTCTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATCTCAATTGAGCTCTCCATATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATCCGAAAGAGCTTTCAAAGAAGAGAGGCAAGACTTTACATATCACTTTACCGTAAACTACCTTCTCACGAAGAGCTTCTTTTAACCCTCGCCAAACTAGATTTCAACTTGCTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGTTGGT 8270320

HSP 4 Score: 466.476 bits (252), Expect = 4.788e-129
Identity = 337/378 (89.15%), Postives = 337/378 (89.15%), Query Frame = 1

Query:      188 TATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT 565
                |||||| ||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||| ||||||||||| |||||||||||||| ||||||||||||||| | |||| |||  ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||| |||||| |||    || ||||||| || || ||| |||||||||||||| ||||| ||||||||||||||||| | | ||||||||||||||
Sbjct:  8583770 TATTCGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTTGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTTGCGGAGAAAAAATACTAGATGAAGCACTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATTCCAATTGAGCTCTCCTTATTTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACGTTACCA--AACTACCTTCTCACGAGC---TT-TTTTAACCCTCGCCAAACTAGATTTCAACTTGTTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGT 8583399

HSP 5 Score: 462.783 bits (250), Expect = 6.194e-128
Identity = 254/256 (99.22%), Postives = 254/256 (99.22%), Query Frame = 1

Query:      915 GGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG 1170
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct:   793328 GGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAGCCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGATACCATAAG 793583

HSP 6 Score: 401.843 bits (217), Expect = 1.370e-109
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 1

Query:      562 AGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCAATTGAAAGGT 784
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct:   792770 AGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTACACTTGAAGAACTAGAGCCTTTTACTCAAGCAATAGAAAGGT 792992

HSP 7 Score: 335.364 bits (181), Expect = 1.409e-89
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   790589 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAAATTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 790772

HSP 8 Score: 254.111 bits (137), Expect = 4.058e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

Query:      781 AGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGT 917
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   793097 AGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGT 793233

HSP 9 Score: 254.111 bits (137), Expect = 4.058e-65
Identity = 171/187 (91.44%), Postives = 171/187 (91.44%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||  ||| |||||||
Sbjct:  8269424 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTTGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAATAATAATAACAATCTTCATCGTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGCTATTTTATAGCATGTG 8269610

HSP 10 Score: 226.412 bits (122), Expect = 8.847e-57
Identity = 166/186 (89.25%), Postives = 166/186 (89.25%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAAT-C-TAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| | |||  | | | |  ||||||||||   ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct:  8584289 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTCGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAACAATAA-CAATCTTCATCAC-GATTTTGGTG---ATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGTTATAATAGTGCATGTG 8584109

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BLAST of TPS58 vs. Genbank
Match Name: AGQN03009317.1
Description: Cannabis sativa cultivar Purple Kush 009322F, whole genome shotgun sequence

HSP 1 Score: 174.705 bits (94), Expect = 3.250e-41
Identity = 127/143 (88.81%), Postives = 127/143 (88.81%), Query Frame = 1

Query:      427 CAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT-GGT 568
                ||||||||||||||||||||||||||||||||||| | | |||||| |||||| || ||| |||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| |||
Sbjct:     3655 CAAAGAAGAGAGGCAAGACTTTACATATCACTTTACCGTAAACTACCTTCTCACGAAGAGCTTCTTTTAACCCTCGCCAAACTAGATTTCAACTTGCTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGTTGGT 3797


Match Name	Summary
CM010792.2	E-Value: 2.181e-142, PID: 99.21 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]
AGQN03009317.1	E-Value: 3.250e-41, PID: 88.81 Description: Cannabis sativa cultivar Purple Kush 009322F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS58 vs. Genbank
Match Name: PKGMv1-63016_t
Description: No definition line

HSP 1 Score: 601.281 bits (325), Expect = 1.660e-170
Identity = 637/777 (81.98%), Postives = 637/777 (81.98%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCA 774
                ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| |  | |||| | ||   ||||||||||   ||||||||||||||||||||||| ||||||||||||||||| ||||||             | | |   |||||| ||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||| ||||||||||| |||||||||||||| |||||||||||||||       ||| |    |    |  || | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||| |||||| |||    || ||||||| || || ||| |||||||||||||| ||||| ||||||||||||||||| | | |||||||||||||      | |   ||||| | |||||||||||| || |||  || |||||||||||||||||| ||  | |||  ||||||||| | |||||| ||  ||||||||||||| ||  | || || ||||| || ||| || | || || || ||||||||| |||||||||||| |||| |||||||||| |||  |||||||||| |||||
Sbjct:       76 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTCGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAACAAT-A--ACAATCTTCATCACGATTTTGGTG---ATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAG-------------A-G-G---TATTCGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTTGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTTGCGGAGAAAAAATACTAGATGAAGCACTTATCTTCACAACTACTCATCTT-------CAG-T----C----C--TT-A-CTCTCCTTATTTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACGTTACCA--AACTACCTTCTCACGAGC---TT-TTTTAACCCTCGCCAAACTAGATTTCAACTTGTTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGG------A-G---TTTGACTTCAAAAGTAAGCAATCTTTTTCAAGAGACAGAATAGTGGAGTGTTACATTTGGAATTATGGAGTATATTTTGAAGCTCAAACTTCCCAAATTAGGTTGATGATGACCAAGTTGATTTCTTTGCTTACTATTATTGATGATTCTTATGATAGCTATGGTACACTTGAAGAGCTAAGGCCTTTTACTGAAGCA 792

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BLAST of TPS58 vs. Genbank
Match Name: PKGMv1-22562_t
Description: No definition line

HSP 1 Score: 350.137 bits (189), Expect = 6.637e-95
Identity = 471/596 (79.03%), Postives = 471/596 (79.03%), Query Frame = 1

Query:      239 GTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAG-A-AAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCA---AT-T--GAAAGGTGGGATATATGTGCCATAGATA-CTCTGCCTGAGTACATGAAA 825
                ||||||||||||||||||||||||||||||||||| |||||||||||||||  | |||| | |||||||||| ||||| |||||||| |||||||||||||||       ||| |    |    |  || | |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |  || || |||| | |  |       |      | || || ||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||      | |   ||||| | |||||||||||| || |||  || |||||||||||||||||| ||  | |||  ||||||||| | |||||| ||  ||||||||||||| ||  | || || ||||| || ||| || | || || || ||||||||| |||||||||||| |||| |||||||||| |||  |||||||||| |||||   || |  |||||||||||||||| ||| |  || | || |||| ||||||||||||
Sbjct:      377 GTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTC--GCAGAGAAGAAATACTAGATGAAGCTCTTATCTTCACAACTACTCATCTT-------CAG-T----C----C--TT-A-CTCTCCATATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATCCGAAAGAGCTTTCAAAGAAGAGAGGCAAGACTTTACATATCACTTTA-C--CAGCTTCTTT-T-A--A-------C------C-CTCGCCAAACTAGATTTCAACTTGCTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGG------A-G---TTTGACTTCAAAAGTAAGCAATCTTTTTCAAGAGACAGAATAGTGGAGTGTTACATTTGGAATTATGGAGTATATTTTGAAGCTCAAACTTCCCAAATTAGGTTGATGATGACCAAGTTGATTTCTTTGCTTACTATTATTGATGATTCTTATGATAGCTATGGTACACTTGAAGAGCTAAGGCCTTTTACTGAAGCATGGATGTTAGAAAGGTGGGATATATCTGCTACTGACAACT-TGCCAGAGTACATGAAA 918

HSP 2 Score: 217.178 bits (117), Expect = 7.024e-55
Identity = 141/152 (92.76%), Postives = 141/152 (92.76%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCG 149
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||| | ||  ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct:      226 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTTGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAATAATAATAACAATCTTCATCGTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTCGCTTTCG 377

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BLAST of TPS58 vs. Genbank
Match Name: PKGMv1-12839_t
Description: No definition line

HSP 1 Score: 329.824 bits (178), Expect = 8.647e-89
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1

Query:     1182 AGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGA 1362
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct:      273 AGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCCCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGA 453

HSP 2 Score: 303.971 bits (164), Expect = 5.241e-81
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGG 167
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      109 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAAATTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGG 275


Match Name	Summary
PKGMv1-63016_t	E-Value: 1.660e-170, PID: 81.98 Description: No definition line [more]
PKGMv1-22562_t	E-Value: 6.637e-95, PID: 79.03 Description: No definition line [more]
PKGMv1-12839_t	E-Value: 8.647e-89, PID: 99.45 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS58 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 662.221 bits (358), Expect = 0.000e+0
Identity = 374/382 (97.91%), Postives = 374/382 (97.91%), Query Frame = 1

Query:      184 GACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT 565
                ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 77746771 GACATATTCGACAAGTACAAGAATGAAAATGAAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACCTTCTCATGAGGAGATTCTTTTAATACTTGCTAAACTAGATTTCAACCTGCTTCAAAAACTACATCAAAAGGAACTAAGTTACATAACGAGGT 77747152

HSP 2 Score: 510.796 bits (276), Expect = 2.143e-142
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 1

Query:     1171 AAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAATT 1452
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77749148 AAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCCAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCCCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAATT 77749429

HSP 3 Score: 494.176 bits (267), Expect = 2.158e-137
Identity = 341/378 (90.21%), Postives = 341/378 (90.21%), Query Frame = 1

Query:      188 TATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT 565
                |||||| ||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||| ||||||||||| |||||||||||||| ||||||||||||||| | |||| |||  ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||| ||  || |||||||||| ||||| ||| |||||||||||||| ||||| ||||||||||||||||| | | ||||||||||||||
Sbjct: 69217678 TATTCGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTTGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTTGCGGAGAAAAAATACTAGATGAAGCACTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATTCCAATTGAGCTCTCCTTATTTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACGTTACCACCAACTACCTTCTCACGAAAAGCTTCTTTTAACTCTTGCCAAACTAGATTTCAACTTGTTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGT 69217301

HSP 4 Score: 477.556 bits (258), Expect = 2.173e-132
Identity = 341/382 (89.27%), Postives = 341/382 (89.27%), Query Frame = 1

Query:      188 TATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGT-GGT 568
                |||| | ||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||  |||||||||| ||||| |||||||| ||||||||||||||| | |||| |||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| | | |||||| |||||| || ||| |||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| |||
Sbjct: 69295513 TATTTGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTCGCAGAGAAGAAATACTAGATGAAGCTCTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATCTCAATTGAGCTCTCCATATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATCCGAAAGAGCTTTCAAAGAAGAGAGGCAAGACTTTACATATTACTTTACCGTAAACTACCTTCTCACGAAGAGCTTCTTTTAACCCTCGCCAAACTAGATTTCAACTTGCTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGTTGGT 69295132

HSP 5 Score: 462.783 bits (250), Expect = 6.086e-128
Identity = 254/256 (99.22%), Postives = 254/256 (99.22%), Query Frame = 1

Query:      915 GGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG 1170
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77748432 GGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGAAGAATATATGCCAGTTGGGATTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG 77748687

HSP 6 Score: 401.843 bits (217), Expect = 1.346e-109
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 1

Query:      562 AGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCAATTGAAAGGT 784
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 77747893 AGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTACACTTGAAGAACTAGAGCCTTTTACTCAAGCAATAGAAAGGT 77748115

HSP 7 Score: 335.364 bits (181), Expect = 1.384e-89
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77745669 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAAATTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 77745852

HSP 8 Score: 254.111 bits (137), Expect = 3.987e-65
Identity = 171/187 (91.44%), Postives = 171/187 (91.44%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||  ||| |||||||
Sbjct: 69296028 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTTGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAATAATAATAACAATCTTCATCGTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGCTATTTTATAGCATGTG 69295842

HSP 9 Score: 254.111 bits (137), Expect = 3.987e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

Query:      781 AGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGT 917
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77748204 AGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGT 77748340

HSP 10 Score: 226.412 bits (122), Expect = 8.692e-57
Identity = 166/186 (89.25%), Postives = 166/186 (89.25%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAAT-C-TAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTG 184
                ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| | |||  | | | |  ||||||||||   ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 69218212 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTCGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAACAATAA-CAATCTTCATCAC-GATTTTGGTG---ATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGTTATAATAGTGCATGTG 69218032


Match Name	Summary
NC_044377.1	E-Value: 2.143e-142, PID: 97.91 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS58 vs. Genbank
Match Name: XM_030622624.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695567), mRNA

HSP 1 Score: 2556.88 bits (1384), Expect = 0.000e+0
Identity = 1437/1461 (98.36%), Postives = 1437/1461 (98.36%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCAATTGAAAGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG---------AAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAATT 1452
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      232 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAAATTTGGAGCAATTTCATAATAATTATCAAAATCTAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTACAAGAATGAAAATGAAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACCTTCTCATGAGGAGATTCTTTTAATACTTGCTAAACTAGATTTCAACCTGCTTCAAAAACTACATCAAAAGGAACTAAGTTACATAACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTACACTTGAAGAACTAGAGCCTTTTACTCAAGCAATAGAAAGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGAAGAATATATGCCAGTTGGGATTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAGTCGGAGCGAAAGAAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCCAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCCCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAATT 1692

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BLAST of TPS58 vs. Genbank
Match Name: XM_030621835.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase (LOC115694741), mRNA

HSP 1 Score: 1483.98 bits (803), Expect = 0.000e+0
Identity = 1251/1468 (85.22%), Postives = 1251/1468 (85.22%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCA---AT-T--GAAAGGTGGGATATATGTGCCATAGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGAT-CATACTGCCCTAGCTATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATAT-ATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG----A---A-G-AAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCC 1448
                ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| |  | |||| | ||   ||||||||||   ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||  |||||| ||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||| ||||||||||| |||||||||||||| ||||||||||||||| | |||| |||  ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||| ||  || |||||||||| ||||| ||| |||||||||||||| ||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||| | |||||||||||| || |||  || |||||||||||||||||| ||  | |||  ||||||||| | |||||| ||  ||||||||||||| ||  | || || ||||| || ||| || | || || || ||||||||| |||||||||||| |||| |||||||||| |||  |||||||||| |||||   || |  |||||||||||||||| ||| |  || | | | || |||||||||||| ||| ||||| |||| |||| ||  | | ||||||||||||| ||||| | ||||||| || |||||||  | ||||||| |||||||||| |||||| | |  |||||||||||  |||||||||| ||||||||||||  |||||||| |||||||| ||||||||| || ||| ||||  |||||| ||| ||||||  |  ||| || |||||||  |||  |||||||||| || |||| |||||| | ||||||||||||||||||||| | || |||||||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||| |||    |   | | |||| ||||  |||  | ||||||||  |||||||||||||||| ||||||||||| || || | ||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||  |||| ||||||||||||  |||||| || ||||||||||||||||||||||| || |||||||| || || ||||||||||| || |||||||||||||||||| || ||||||||||||||||
Sbjct:      262 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTCGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAACAAT-A--ACAATCTTCATCACGATTTTGGTG---ATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGTTATAATAGTGCATGTGAGGTATTCGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTTGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTTGCGGAGAAAAAATACTAGATGAAGCACTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATTCCAATTGAGCTCTCCTTATTTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACGTTACCACCAACTACCTTCTCACGAAAAGCTTCTTTTAACTCTTGCCAAACTAGATTTCAACTTGTTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGTGGTGGAAGGAGTTTGACTTCAAAAGTAAGCAATCTTTTTCAAGAGACAGAATAGTGGAGTGTTACATTTGGAATTATGGAGTATATTTTGAAGCTCAAACTTCCCAAATTAGGTTGATGATGACCAAGTTGATTTCTTTGCTTACTATTATTGATGATTCTTATGATAGCTATGGTACACTTGAAGAGCTAAGGCCTTTTACTGAAGCATGGATGTTAGAAAGGTGGGATATATCTGCTACTGAAAATTTACCAGAGTACATGAAAGTATGTTACAAGAAATTTTTAGAATTTTTCAATGAAATTGAAGAATTTACAAAGGAAA-ATCCATACTGTGCGAGCTATGTTAAGAAAGGGTTGCAATGTATGGTTAGAGCTTATAGTAAGGAAGCCCAATGGTTACACAATAAATATATGCCAACATTTGATGAATATTAT-CCAATTGGACTTGATAATGCTGGATCTGATGAGCTAATATCAATGGCCTTTTGTGGAATGGGAAATGTTGTAACAAAAGAATCTATGGATTGGATATTTTCTCAGCCCCAACCTAAAATTATACGAACTATGTCAATTGTTGGAAGACTTATGAATGACATTGGCTACCACAAGTCGGATCGAAGAAAATTATCAAAAGATGTAGTGGCTTCTGCTGTGGAGTGTTACATCAAACAATATGGTGTAACAGATGAAGAAGCTATAAAGAAACTTAACGAACAAGTTAATGATTCATGGAAGGATCTCAATGAAGATCTTCTCTATCCAATCGCTATTCCTAGACCACTCTTAATGAGAGTTCTCAATCTTGTACGAGTGAACCATGAGATGTACAGAGAAGGTGACGGTTTTACACAACCAACATTGCTCAAGAATTTGATTGATACTCTCATCATCAATCC 1721

[Close]

BLAST of TPS58 vs. Genbank
Match Name: XM_030622484.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695419), mRNA

HSP 1 Score: 1472.9 bits (797), Expect = 0.000e+0
Identity = 1248/1468 (85.01%), Postives = 1248/1468 (85.01%), Query Frame = 1

Query:        1 CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGAAAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC-TAAT--TGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGGTTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTACAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAAATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGTTAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTACATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACTTGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAAGTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCATTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTTTTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTGCTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAAGAACTAGAGCCTTTTACTCAAGCA---AT-T--GAAAGGTGGGATATATGTGCCATAGATA-CTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGATCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGCTATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGCCAAATGGTTACACACAAAATATATACCAACATTAGATGAATAT-ATGCCAGTTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATTGGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAATCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGAATGACATTGGCTACCATAAG----A---A-G-AAATCATCAGGAGAAATTGTGGCTTCAACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTATAGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAGATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTAAAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTACACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCC 1448
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||  ||| ||||||||  |||| | ||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||  |||||||||| ||||| |||||||| ||||||||||||||| | |||| |||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| | | |||||| |||||| || ||| |||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||| | |||||||||||| || |||  || |||||||||||||||||| ||  | |||  ||||||||| | |||||| ||  ||||||||||||| ||  | || || ||||| || ||| || | || || || ||||||||| |||||||||||| |||| |||||||||| |||  |||||||||| |||||   || |  |||||||||||||||| ||| |  || | || |||| |||||||||||| ||| |||||  |||  ||| ||  | | ||||||||||||| ||||| | |||||||  ||||||||| | || |||  |||||||||| |||||| | |  |||||||||||  |||||||| | ||||||||||||  |||||||| |||||||| ||||||||| || ||| ||||  |||||| ||| ||||||     ||| || |||||||  |||  ||||||||||||| |||| |||||| | ||||||||||||||||||||| | || |||||||| ||||||| ||||||| |||| ||||||||| |||||||||||||||||||||| |||    |   | | |||| ||||  |||  | ||||||||  |||||||||||||||| ||||||||||| || || | ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||| ||||  |||| ||||||||||||  |||||| || ||||||||||||||||||||||| || |||||||| || || ||||||||||| || |||||||||||||||||| || ||||||||||||||||
Sbjct:      226 CTTGAATATATTGATGATATTCAACGATTGGGGTTATCTTATTATTTTGAAAATGAAATTGAACAAGTTTTGAAGCAATTTCATAATAATAATAACAATCTTCATCGTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTCGCTTTCGGTTGCTTAGGGAACAAGGCTATTTTATAGCATGTGAGGTATTTGCCAAATATAAGAATGAGAAAGGAAAATTTAAGGAATCAATTTCGAGTGACATTCGAGGAATGTTGAACTTGTATGAAGCTTCACAAATGAGAGTTCGCAGAGAAGAAATACTAGATGAAGCTCTTATCTTCACAACTACTCATCTTCAGTCCTTAGTGGAAACATCTCAATTGAGCTCTCCATATCTAGACCTAGTGAAACATGCCCTAATGCACCCTATCCGAAAGAGCTTTCAAAGAAGAGAGGCAAGACTTTACATATTACTTTACCGTAAACTACCTTCTCACGAAGAGCTTCTTTTAACCCTCGCCAAACTAGATTTCAACTTGCTTCAACAACTACATCAAAAGGAATTGAATTATATTACGAGGTGGTGGAAGGAGTTTGACTTCAAAAGTAAGCAATCTTTTTCAAGAGACAGAATAGTGGAGTGTTACATTTGGAATTATGGAGTATATTTTGAAGCTCAAACTTCCCAAATTAGGTTGATGATGACCAAGTTGATTTCTTTGCTTACTATTATTGATGATTCTTATGATAGCTATGGTACACTTGAAGAGCTAAGGCCTTTTACTGAAGCATGGATGTTAGAAAGGTGGGATATATCTGCTACTGACAACT-TGCCAGAGTACATGAAAGTATGTTACAAAAAATGTTTAGAATTTTTCAATGAAATTGAAGAATTTACAAAGGAAAATTCATACTGCGCGAGTTATATTAAGAAAGGGTTGCAATGTATGGTTAGAGCTTATAGTAAGGAAGTCCAATGGTTACACAATAAATATATGCCAACATTTGATGAATATTAT-CCAATTGGACTTGATAATGCTGGATCTGAAGAGCTAATATCAATGGCCTTTTGTGGAATGGGAGATGTTGTAACAAAAGAATCTATGGATTGGATATTTTCTCAGCCCCAACCTAAGATTATACGAACTATGTCAATTGTTGGAAGACTTATGAATGACATTGGCTACCACAAGTCGGATCGAAGAAAATTATCAAAAGATGTAGTGGCTTCCGCTGTGGAGTGTTACATCAAACAATATGGTGTAACAGATGAAGAAGCTATAGAGAAACTTAACGAACAAGTTAATGATTCATGGAAGGATCTCAATGAAGATCTTCTTTATCCAATCGCTATTCCTAGACCACTCTTAATGAGAGTTCTCAATCTTGTACGAGTGAACCATGAGATGTACAGAGAAGGTGACGGTTTTACACAACCAACATTGCTCAAGAATTTGATTGATACTCTCATCATCAATCC 1691


Match Name	Summary
XM_030622624.1	E-Value: 0.000e+0, PID: 98.36 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695567), mRNA [more]
XM_030621835.1	E-Value: 0.000e+0, PID: 85.22 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase (LOC115694741), mRNA [more]
XM_030622484.1	E-Value: 0.000e+0, PID: 85.01 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695419), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 24..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..23
None	No IPR available	TMHMM	TMhelix		coord: 4..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 30..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..29
None	No IPR available	TMHMM	TMhelix		coord: 5..27
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..49
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 1..484
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..484
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 1..174 e-value: 3.0E-64 score: 218.1
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 165..430 e-value: 3.0E-101 score: 338.3
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 1..134 e-value: 1.7E-47 score: 161.6
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 175..484 e-value: 5.8E-114 score: 382.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 160..484
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 1..156

TPS58

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGA AAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC TAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGG TTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTA CAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAG GAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAA ATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGT TAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCC TAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTAC ATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACT TGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAA GTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCA TTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTT TTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTG CTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAA GAACTAGAGCCTTTTACTCAAGCAATTGAAAGGTGGGATATATGTGCCAT AGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGA TCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGC TATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGC CAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAG TTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATT GGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAA TCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGA ATGACATTGGCTACCATAAGAAGAAATCATCAGGAGAAATTGTGGCTTCA ACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTAT AGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAG ATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTA AAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTAC ACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAA TT
Sequence Length	1452
Sequence Checksum	6ca7a664317437940de462ba70cf8122

Sequence

CTTGAATATATTGATGATATTCAACGATTGGGGTTGTCTTATTATTTTGA
AAATGAAATTGAACAAATTTTGGAGCAATTTCATAATAATTATCAAAATC
TAATTGATTTTGGTGATAATAACCTTTATGCTGATGCTCTTTGCTTTCGG
TTGCTTAGGCAACAAGGTTATAATATTGCATGTGACATATTCGACAAGTA
CAAGAATGAAAAAGGAAAATTTAAAGAATCAATTTCGAGTGACATTCGAG
GAATGTTGAACTTGTATGAAGCTGCACAAATGAGAGTTCATGGAGAGAAA
ATACTAGACGAAGCACTTATCTTTACAACTACTCATCTTGAATCCTCAGT
TAAAACATGTCAATTGAGCTCTCCTTATCTAGACCTAGTGAAACATGCCC
TAATGCACCCTATTCGAAAGAGCTTACAAAGAAGAGAGGCAAGACTTTAC
ATATCACTTTATCATCAACTACTTTCTCATGAGGAGATTCTTTTAACACT
TGCTAAATTAGATTTCAACTTGCTTCAAAAACTACATCAAAAGGAACTAA
GTTATATTACGAGGTGGTGGAAGGAGTTTGATTACAAAAGTAAGCATTCA
TTTATAAAAGACAGAATAGTGGAGTGCTATTTCTGGGTTTATGGAGTGTT
TTTTGAGGCAGAAACTTCCCAAATCAGACTAATAATCACCAAATTAATTG
CTATTCTCACAATAATTGATGATGCTTATGATAGCTTTGGTTCACTTGAA
GAACTAGAGCCTTTTACTCAAGCAATTGAAAGGTGGGATATATGTGCCAT
AGATACTCTGCCTGAGTACATGAAAATATTTTACATGAAACTTTTGGAGA
TCTACAATGAAATTGAACAATTTTCTAAGGAAAGATCATACTGCCCTAGC
TATGCTAAGAAAGGGGTGCAATCTCTAATTAGAGCTTATTTTAAGGAAGC
CAAATGGTTACACACAAAATATATACCAACATTAGATGAATATATGCCAG
TTGGGGTTGATAGTGCAGGATCTTTTATGCTCATTTCAATGGTTTTTATT
GGAATGGGAGATATTGTTACAAAACATTCTATGGATTGGATATTTTCTAA
TCCTCAACCTAAAATTATACAAACTATGGCAATAGTTGGAAGAGTTATGA
ATGACATTGGCTACCATAAGAAGAAATCATCAGGAGAAATTGTGGCTTCA
ACTGTGGAGTGTTACATGAAACAATATGGCGTGACTGGTGAAGAAGCTAT
AGAGAAACTTAGCGAACAAGTTAAAGATTCATGGAAAGATCTCAATGAAG
ATCTTCTCAATCCAATCACTATCTCTAGGCCACTCTTAATGCAAGTTCTA
AAGCTTGTACGAGTGAACCATGAGATTTATAGAGAAGGAGATGGCTTTAC
ACAACCCACTTTGCTCAAGAATTTGATTCATTCTCTCATCATCAATCCAA
TT

Sequence Length

1452

Sequence Checksum

6ca7a664317437940de462ba70cf8122

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS58
Identifier	TPS58
Time Accessioned	Saturday, December 21, 2024 - 12:46
Time Last Modified	Saturday, December 21, 2024 - 12:46