MT295505.1 | ICGRC

Annotations

Contact

Cross Reference

Location on Map

Properties

Relationship

Publication

Sequences

Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR036965	Terpene_synth_N_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of MT295505.1 vs. Genbank
Match Name: AGQN03000118.1
Description: Cannabis sativa cultivar Purple Kush 000117F, whole genome shotgun sequence

HSP 1 Score: 573.582 bits (310), Expect = 4.574e-161
Identity = 315/317 (99.37%), Postives = 315/317 (99.37%), Query Frame = 1

Query:     2087 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 2403
                ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   340179 AGAGAGAATCCAAAGAAGGGAAATTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGA-TTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 339864

HSP 2 Score: 510.796 bits (276), Expect = 3.637e-142
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 1

Query:      147 GAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACTCTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGATCCCTTCAAATTCTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCCTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGG 431
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   352771 GAAGTTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACTCTCTGTCTCGTCATATGACACTGCCTGGGTGGCAATGATCCCTTCAAATTCTGGGCAGCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAATCAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCTTTGCTTATGAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGATGGGGTGTTGGCGAAGAACAAATAGACAAGGG 352487

HSP 3 Score: 449.856 bits (243), Expect = 8.042e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:     1843 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 2088
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   340549 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGGCCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 340304

HSP 4 Score: 409.23 bits (221), Expect = 1.365e-111
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 1

Query:      610 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAG-TTCC 833
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct:   343794 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGGTTCC 343570

HSP 5 Score: 399.997 bits (216), Expect = 8.214e-109
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 1

Query:     1483 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGT 1702
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct:   341378 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAAC-TCATTCAATTGTTGGAAAAGT 341160

HSP 6 Score: 398.15 bits (215), Expect = 2.954e-108
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 1

Query:     1046 CAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 1275
                ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   343033 CAGATCCATTAATTCGATTTTCAGAAGATTATATATACAATTACCTTGGGAATCATACCAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATACAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 342804

HSP 7 Score: 337.211 bits (182), Expect = 6.532e-90
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1

Query:      430 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAG 611
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   344814 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAG 344633

HSP 8 Score: 263.345 bits (142), Expect = 1.124e-67
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:     1701 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 1842
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   341058 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 340917

HSP 9 Score: 230.105 bits (124), Expect = 1.140e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query:      827 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 950
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   343494 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 343371

HSP 10 Score: 211.638 bits (114), Expect = 4.131e-52
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query:     1272 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 1385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   342699 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 342586

HSP 11 Score: 193.172 bits (104), Expect = 1.496e-46
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1

Query:     1385 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTT 1491
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:   342494 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGTGTT 342388

HSP 12 Score: 178.399 bits (96), Expect = 4.190e-42
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 1

Query:      947 ACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAG 1048
                ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct:   343211 ACAGATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTATCTTCAG 343110

HSP 13 Score: 161.779 bits (87), Expect = 4.220e-37
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 1

Query:        4 GTGACTGCAACACTCACTCATTCTGAGACAACAATCATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTCTTCTTCTTCCTCATCAG 94
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct:   353148 GTGACTGCAACACTCACTCATTCTGAGACAACAATCATGTCTCATTCATTGCATTCCAACATTAGGTGCTCCTCT-CTTCTTCCTCATCAG 353059


Match Name	Summary
AGQN03000118.1	E-Value: 4.574e-161, PID: 99.37 Description: Cannabis sativa cultivar Purple Kush 000117F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table


Match Name	Summary
There are no matches against Genbank for this mRNA.

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of MT295505.1 vs. Genbank
Match Name: NC_044373.1
Description: Cannabis sativa chromosome 4, cs10, whole genome shotgun sequence

HSP 1 Score: 586.508 bits (317), Expect = 5.772e-165
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 1

Query:     2087 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 2403
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22538893 AGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 22538577

HSP 2 Score: 449.856 bits (243), Expect = 7.901e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:     1843 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 2088
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22539263 TGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAG 22539018

HSP 3 Score: 425.85 bits (230), Expect = 1.331e-116
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query:     1046 CAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 1275
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551101 CAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTA 22550872

HSP 4 Score: 398.15 bits (215), Expect = 2.903e-108
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 1

Query:      610 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAG-TTCC 833
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22551861 AGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGGTTCC 22551637

HSP 5 Score: 396.303 bits (214), Expect = 1.044e-107
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 1

Query:     1483 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGT 1702
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 22540095 AGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGT 22539876

HSP 6 Score: 326.131 bits (176), Expect = 1.389e-86
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 1

Query:      430 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAG 611
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 22552889 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAG 22552708

HSP 7 Score: 263.345 bits (142), Expect = 1.105e-67
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:     1701 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 1842
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22539773 GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATT 22539632

HSP 8 Score: 230.105 bits (124), Expect = 1.120e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query:      827 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 950
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551561 CAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA 22551438

HSP 9 Score: 211.638 bits (114), Expect = 4.059e-52
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query:     1272 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 1385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22550767 GGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTG 22550654

HSP 10 Score: 183.939 bits (99), Expect = 8.848e-44
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1

Query:      947 ACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAG 1048
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551279 ACAGATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAG 22551178

HSP 11 Score: 182.092 bits (98), Expect = 3.182e-43
Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 1

Query:     1385 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTT 1491
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 22541217 GTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGTGTT 22541111


Match Name	Summary
NC_044373.1	E-Value: 5.772e-165, PID: 100.00 Description: Cannabis sativa chromosome 4, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of MT295505.1 vs. Genbank
Match Name: XM_030641434.1
Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X2, mRNA

HSP 1 Score: 3596.55 bits (1947), Expect = 0.000e+0
Identity = 1965/1974 (99.54%), Postives = 1965/1974 (99.54%), Query Frame = 1

Query:      430 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 2403
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      338 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTGTAA 2311

[Close]

BLAST of MT295505.1 vs. Genbank
Match Name: XM_030641433.1
Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X1, mRNA

HSP 1 Score: 3589.16 bits (1943), Expect = 0.000e+0
Identity = 1961/1970 (99.54%), Postives = 1961/1970 (99.54%), Query Frame = 1

Query:      430 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATT 2399
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      339 GGCTTGTCTTTCATAGAGGAAAATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGAAGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATATTACTCTTGAGCCATCCAATTATAATGACCTAATTCATAACAGAAAGGTTTCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTTAGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCTTTAAGTACCAAAGGAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACAGCTGTTACTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTGCTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAGATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATAGAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAAATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTGCAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGATCCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCATACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCATCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGTCATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACTCAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCTATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGACACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCGGAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAATCAATACACCGTGAAGAACTCAAGACTCTTTCTAGGTGGGTTGTAGAGAATAGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTTTTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGCATATCATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGATGTTGGAGGTTCAGAAGAGGAACTAGTAAATCTCATTCAATTGTTGGAAAAGTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTATTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTCGTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGATTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCGTCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTAGGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGATCTATGCTTTCTGAGGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCACTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAAGAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGGCTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTGTAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGATAGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGATCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATT 2308


Match Name	Summary
XM_030641434.1	E-Value: 0.000e+0, PID: 99.54 Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X2, mRNA [more]
XM_030641433.1	E-Value: 0.000e+0, PID: 99.54 Description: PREDICTED: Cannabis sativa ent-kaur-16-ene synthase, chloroplastic (LOC115712980), transcript variant X1, mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	GENE3D	1.50.10.160		coord: 68..270 e-value: 1.1E-142 score: 477.7
None	No IPR available	PANTHER	PTHR31739:SF3	ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC	coord: 52..796
None	No IPR available	PANTHER	PTHR31739	FAMILY NOT NAMED	coord: 52..796
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..52
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 24..51
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..23
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..52
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 61..479 e-value: 1.1E-142 score: 477.7
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 482..799 e-value: 1.0E-85 score: 289.5
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 470..795
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 231..429 e-value: 2.6E-41 score: 141.4
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 472..739 e-value: 3.0E-70 score: 236.6
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 71..183
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 239..452

Cannabis sativa cultivar Purple Kush terpene synthase 65 mRNA
partial cds

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	GGTGTGACTGCAACACTCACTCATTCTGAGACAACAATCATGTCTCATTC ATTGCATTCCAACATTAGGTGCTCCTCTTCTTCTTCCTCATCAGCTTCTC CCATACCAAGACTAAATGGAACAAGTAAAAGCAACATAGCTGTTTTGAAG TTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACT CTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGATCCCTTCAAATT CTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAAT CAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCCTTGCTTAT GAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGAT GGGGTGTTGGCGAAGAACAAATAGACAAGGGCTTGTCTTTCATAGAGGAA AATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGA AGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATA TTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTT TCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTT AGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCT TTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACA GCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTG CTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAG ATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATA GAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA ATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTG CAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGAT CCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCA TACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCA TCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGT CATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACT CAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCT ATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGAC ACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCG GAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAAT CAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAAT AGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTT TTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATAT CATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGAT GTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAA GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTA TTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTC GTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGA TTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCG TCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTA GGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGA GGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCA CTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAA GAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGG CTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTG TAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGAT AGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGT GTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGA TCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTG TAA
Sequence Length	2403
Sequence Checksum	edf8dea5e109fb2a72796d7a9a1892bc

Sequence

GGTGTGACTGCAACACTCACTCATTCTGAGACAACAATCATGTCTCATTC
ATTGCATTCCAACATTAGGTGCTCCTCTTCTTCTTCCTCATCAGCTTCTC
CCATACCAAGACTAAATGGAACAAGTAAAAGCAACATAGCTGTTTTGAAG
TTTGAGGAGACCAAAGAGAGAATAAAGAAGATGTTCAATAATGTTGAACT
CTCTGTCTCGTCTTATGACACTGCCTGGGTGGCAATGATCCCTTCAAATT
CTGGGCATCACCCTTTCTTTCCTCAATGTGTAAATTGGTTACTAGAGAAT
CAGCACTCTGACGGTTCATGGGGTCTTCCTCATCGTCATCCCTTGCTTAT
GAAAGATGCTCTTTTATCTACTTTAACTAGTGTACTTGCAATGAAGCGAT
GGGGTGTTGGCGAAGAACAAATAGACAAGGGCTTGTCTTTCATAGAGGAA
AATATAGCTTCAGCCATTGATGAGAAGCAATGTTCACCTATTGGATTTGA
AGTAATATTTCCTACAATGATTGATTATGCCAAAAAATCAGATCTGAATA
TTACTCTTGAGCCATCCAATCATAATGACCTAGTTCATAACAGAAAGGTT
TCACTTGAAAGAGCCTCAGGAAGCTACTCAGAGGGTCATGAAGCATACTT
AGTGTACATTTCAGAAGGTCTTGGAAAGCCACTGGATTGTGAAAGAGTCT
TTAAGTACCAAAGAAAAAATGGTTCTCTGTTTAATTCTCCATCCACCACA
GCTGTTGCTTTTACAAACCATGGGAATGCTGACTGTCTTAAGTATCTCTG
CTCTGTTGTAGACAAGTTTGGAAGTGCAGTTCCAACAGTATATCCTCTAG
ATATTTATGCTCGTCTCTCAATGGTGGACAATCTCCAAAGGTTGGGGATA
GAACGATTTTTCAAAGAGGAAATCAGAAGTGTACTGGATGAAACATACAA
ATATTGGCTGCAAGGAGAGGAGTGTGTTCTCTTAGATGCTTCCACCTGTG
CAATGGCATTTCGTTTATTGCGTGTTAATGGATATGATGTCTCTTCAGAT
CCATTAGTTCGATTTTCAGAAGATTATATATTCAATTACCTTGGAAATCA
TACGAAGGATATAGATGCTATCTTGGAAATATTTAGAGCATCCGAGATCA
TCATACACCCAAATGAATCAATCTTGGAGAAGCAAAATTTCTGTACAAGT
CATTTTCTAGAACAAGAGTTATTCAGCATTTCAACTAGGGGAGATAAACT
CAATAAAAATATTGGCAAAGTGGTAAGTGAAGCTCTTAAGATTCCTTTCT
ATGCAAACTTGGAACGACTAGCAAGTAGAAGAGCCATAGAGTACTATGAC
ACTGATAGTACGAGGATTCTGAAAACTTCATATTGTTCCTCAAATGTTCG
GAGCAAGGATTTCCTAATATTAGCAGTTGAAGACTTCAACATGTGCCAAT
CAATACACCGTGAAGAACTCAAAATTCTTTCTAGGTGGGTTGTAGAGAAT
AGGTTGGACAAGCTAAAGTTTGCTAGGCAGAAGCTGGCATACTGTTACTT
TTCTGCTGCTGCTACTCTTTCTTCTCCTGAATTATCTGATGCCCGTATAT
CATGGGCGAAAAATGGGGTACTTACTACAGTGGTTGATGATTTTTTTGAT
GTTGGAGGTTCAGAAGAGGAACTAGTAAACCTCATTCAATTGTTGGAAAA
GTGGGATGTAGATGTCAGTGTTGATTGTTTATCGGAGCAAGTTGAAATTA
TTTATTTAGCACTTCATGGCACAATCTCTGAAATTGGAGAAAAGGCGTTC
GTGTGGCAAGGACGTAGTGTGACAAATCACATAATAGAGATTTGGCTGGA
TTTGCTCAAGTCTATGTTGAAGGAAGCTCAATGGTTGAAATACGAGACCG
TCCCAACAATAGATGAGTATATGAAAAATGGATACATATCATTTGCCTTA
GGACCTATAGTCCTTCCAGCACTTTACTTAGTTGGACCTATGCTTTCTGA
GGATGTTACAAGACATCCTGAGCTCCATTATCTATATAAACTCATGAGCA
CTTCCGGACGACTTCTCAACGATATCCACGGCTTCAAGAGAGAATCCAAA
GAAGGGAAACTGAATATAGTGTCATTAAGCCTACTGGCGCGTGGTTTTGG
CTCTGGTTCTTCTTCTGAAGAAGAGATCATTAATGAAATGAAAAGTGTTG
TAAATGGTAAGAGGAGAGAATTGCTGAGGCTAGTTTTTAAGGAAAAAGAT
AGCATTGTTCCAAGAGCTTGCAAGGACTTGTTCTGGAAAATGAGCCAAGT
GTTGCACCTATTTTATGCCAATGACGACGGATTCACCTCAAATGAGATGA
TCAATGTCGCAAAAGCAATAATCGAGGAGCCCATAATTGAAAATAAATTG
TAA

Sequence Length

2403

Sequence Checksum

edf8dea5e109fb2a72796d7a9a1892bc

Summary

Resource Type	mRNA
Accession	MT295505.1
Organism	Cannabis sativa L.
Name	MT295505.1
Identifier	MT295505.1
Time Accessioned	Thursday, November 21, 2024 - 09:31
Time Last Modified	Thursday, November 21, 2024 - 09:31